Agrobacterium sp. CGMCC 11546: GSF67_13920
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Entry
GSF67_13920 CDS
T10431
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
agrc Agrobacterium sp. CGMCC 11546
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_13920 (addB)
Enzymes [BR:
agrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSF67_13920 (addB)
DNA repair and recombination proteins [BR:
agrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GSF67_13920 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QKW98088
LinkDB
All DBs
Position
1:complement(2741940..2745125)
Genome browser
AA seq
1061 aa
AA seq
DB search
MTLTHHAKRVLTIAAGTPFLKTLAETLCDGRLTAGYRYDPTDPLSLASVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFDIENPEIMDLAPPISGTGRQIELARLI
LAWRNSLPDAIRAIHSDSPLVAPASPADAIWLARALGEVIDAMDTEEKDWEALQHLDTGE
HAQWWQLTADFLKIASVFWPARLAELNRSSAGRHRNAILRAEADRLANLPDTGPIIVAGS
TGSIPAAADLIAAVAALPQGTVVLPGLDLAMSEEQWQAIAEDPTDPSSRTHPQYGLYMLL
QKLGMFRDEVVQIGALDRDLEKRAAVFSAALAPAKSTSDWNGWREGRDPGFFDEAFAAAT
LIEAANQREEATAIAVALRLALEAPGPGRPSQAALITPDRGLARRVATELQRFGIEADDS
AGTPLSATPQAGLTQLALEAILRPGDPVPIISLLKHPLARFGLSGDAFTKASKALELIAL
RGGRVETEIGNLEVVLDAQLLAQRDNRHPPAWRVALPEGSVDAARDLARRIAIATEPLGS
AFIRRDRSGRAFTDKLPLSDWAGRTGRVIEAICADDSNDLAALWSGEAGDKLSSLFAELM
ESGDILDADGPQWIDIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVVIGGLNEG
LWPGQTANNPFLSRSMKTAIGLEPPERRIGQLAHDFEMANGTRQIFYTRALRQGSTPAVA
SRWLQRLLALGGENFAEQLRKRGETYRHWAGLMDESIDQETVKRPAPKPPADLQPKSYSF
SEVGRLRRDPYAIYARRILKLDPLDPFNRDPTAADRGTLYHGIIERYSREGHIPGTPASL
EAMQRILDDCFDAENLPVHVDVIWRPRFAAVARAFIDWEKERHPSIRRSFFEARAGQEIA
EAGIRLTGVADRIDIKTSGQADIIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFRET
GSPTPENLIYVRLRPGDRFFADQVNNEHSNRSGKRPPKSAIELATESIDQLAKFVRSLRD
GENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcacccaccacgcaaagcgcgtcctgacgatcgctgcgggaacaccgtttctc
aaaacgctcgcggaaacgctgtgtgacgggcggctgacagccggctatagatatgatccg
accgatcctctttcgcttgcgagcgtgacgatctatgtgccgacgcggcgctctgcgcgc
gtgctgcgctccgaattcgtcgatcttctgggcggccgatccgccattctgccgctgatc
cggcctctgggtgaaacggatgacgatagcggtttcttcgatatcgaaaatcccgagatc
atggatctggcgccaccgatttccggcaccggccggcagatcgaactggcgcgcctcatt
ctcgcctggcgcaacagcctgcccgacgccatccgggcgatccattcggattcaccgctc
gtcgctcccgccagccccgcggatgccatctggctggcgcgtgcgctcggcgaggtgatc
gatgcgatggataccgaagaaaaggactgggaagcgctgcagcatctcgataccggcgaa
catgcgcaatggtggcagctgacggcggatttcctgaagatcgccagcgtcttctggcca
gcgcggcttgcagaactcaaccgttcctccgcgggccggcatcgcaacgccatcctgcgg
gcagaggcggaccggcttgccaacctgccggatacggggccgatcatcgtggctggctcc
acgggctccattccggccgccgccgatctcatcgccgccgtcgcagccctgccgcaggga
accgttgtgcttccggggctcgatcttgcgatgtccgaagaacagtggcaggcgattgcc
gaggaccccaccgatccttcgagccgcacccatccgcaatatgggctttatatgctgctg
cagaagctcggcatgttccgcgacgaggtggttcagatcggcgccctcgaccgtgatctc
gaaaagcgcgcggccgtattttcggcagcactcgcacccgccaagtccacaagcgactgg
aacggctggcgcgaaggccgggatcccggatttttcgatgaagccttcgcagcggccaca
ttgatcgaggccgccaatcagcgtgaagaggcgaccgccatcgcggtggcgctccggctg
gcgctggaggccccgggtcctgggcggccgtctcaggcggcactgataacgcccgaccgc
ggactggcgcggcgggtcgcgacggagttgcaacgttttggcatcgaggcagacgattcg
gccgggacgccgctttccgccacgccgcaggcagggctgacacaactggcgctggaagcc
attctcaggcccggagacccggtgccaatcatttcgctcctgaagcatcccctcgcccgc
ttcgggctttccggtgacgcttttaccaaggcctcgaaagcgctggaactgatcgctctg
cgcggtggccgcgtcgaaaccgaaataggcaatctcgaagtggttctggacgcgcagctt
ctggcccagcgtgacaacaggcacccgcccgcctggcgggtggcgctgccggagggaagt
gttgatgcggcccgcgatctggcccggcggatcgccatcgctacggagccactcggctcc
gcgttcatccgtcgtgaccgctccgggcgcgccttcaccgataaattgccgctttccgat
tgggctgggcggacaggccgagtgatcgaggccatctgtgccgacgacagcaatgatctg
gccgcattgtggtctggcgaggcgggagacaaactctcaagtctctttgcggaactgatg
gagagcggcgacatcctcgacgcggacgggccgcaatggatcgatatttttgcagcgctg
gtggcaggcgaatcgatcaagccgcgttccatgcgccatccgcgcattttcatcttcggc
gcgctggaggcacggctgcaaagcgtcgacaccgtcgtcatcggtggtctcaatgaaggg
ctctggccgggccagacggccaataatccgttcctgtcccgcagcatgaagaccgccatc
gggctggagccgccggaacggcgcatcggccagctcgcgcatgacttcgagatggcgaac
ggcacccggcagatcttttacacccgggcgctgaggcagggctccacccccgccgtcgcc
tcccgctggctgcaaaggctcctggctctgggtggcgagaatttcgccgaacaactgagg
aagcgcggcgagacctatcgccattgggcaggtctgatggatgagagcatcgatcaggag
acggtaaagcgccctgcccccaaaccgccggctgatctgcagccgaagagctactccttc
agcgaagtagggcggctgcggcgggatccctatgcgatctatgcgcggcgcatcctgaag
ctcgatccgctcgatccgttcaaccgcgacccgaccgccgccgatcgcggcacgctttat
cacgggattattgagcgctattcccgtgaggggcatattcccggcacaccggcctcgctt
gaggcgatgcaacgcattctcgacgactgtttcgacgcggaaaacctgcctgtgcatgtg
gatgtcatctggcgtccgcgttttgcggcggtggcccgcgccttcatcgattgggagaaa
gaacggcacccctccatccgccgcagcttcttcgaagcacgggccgggcaggagatcgcc
gaggcgggcatccggctgaccggcgttgccgaccgtatcgacatcaagaccagcggccag
gcggatattatcgactacaagaccggtcttgctccatcagtcaatcaggcgcgagcgttg
ctcgacccgcagctggcgctggaagcggcggcactgatgcgcggtgccttccgcgaaaca
ggttcgcccacgcccgaaaacctcatctatgtacgcctgcggccgggagaccgatttttt
gccgatcaggtgaataacgaacattccaaccgaagcggcaagagaccgccgaaatccgct
atcgaactggcaacggaatcgatcgaccagcttgccaaattcgtgcgctcgctgcgcgac
ggtgaaaacggtttcgcctcccggctggtgccggaagagcagcaatcctatggcggggaa
tatgaccacctcgcccgcgtttcagaatggtcgacggcggaaccgggagacggcgatgac
gattga
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integrated database retrieval system
