Agrobacterium sp. CGMCC 11546: GSF67_16500
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Entry
GSF67_16500 CDS
T10431
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc03420
Nucleotide excision repair
agrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSF67_16500
03430 Mismatch repair
GSF67_16500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_16500
Enzymes [BR:
agrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSF67_16500
DNA repair and recombination proteins [BR:
agrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSF67_16500
MMR (mismatch excision repair)
Other MMR factors
GSF67_16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
HHH_5
HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QKW98794
LinkDB
All DBs
Position
2:247800..249866
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AA seq
688 aa
AA seq
DB search
MAVAYLDKLNEQQRKAVEHGVGLADGETAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMSRRVERICKQVIGANSAIMTDALAWSGTFHGIGARLLRIYAEQI
GLNIDFTIHDREDSADLMNLVRHELGFSKTESRFPTKGTCLAIYSRAVNSQTPLKDILRQ
HYPWVADWQSELKELFAAYVEAKQIQNVLDYDDLLLYWAQMVSDPILADDIGNRFDHVMV
DEYQDTNRLQASVLMAMKPAGRGLTVVGDDAQSIYSFRAATVRNILDFPACFSPAADIIT
LDRNYRSTQPILAAANGVIDLARERFTKNLWTERQSLERPKLVTVKDETEQANFIIDQIL
ANRETGTTLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGNILDTIAPDPEPLLALAEIPPPPKTGDDWTAFTQL
LVGLRRGQNGWPGEIGLARVWYEPHLERIHEDADTRKADLQQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLSLSTIHSAKGQEWRSVFILNVVDGCIPSDLGVGTTQEL
EEERRLLYVAMTRAKDNLSLITPQRFFTGGQNQQGDRHVYAARTRFIPATLLQFFETMSW
PLVSAAASERSAQQIRIDVGARMRAMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcctatctggacaagttgaacgagcagcaacgcaaggcagtggaacacggt
gtcggcctggcggatggagagacggccggcccgctgctgatcattgccggcgccggttcc
ggcaagaccaatacgctcgcccaccgcgtcgcccacctgatcgtgaatggcgccgatccc
cgccgaattctgctgatgacgttttcgcggcgagctgcctccgaaatgtcgcgacgtgtc
gagcggatctgcaagcaagttatcggggcaaattcggcaatcatgaccgatgcactggct
tggtccggcacgtttcacggcatcggcgcacgcctgttgcgcatctatgccgagcagatc
gggctcaatatcgatttcaccatccacgaccgcgaagacagcgccgacctgatgaacctt
gtccggcacgaactcggtttctccaagacagaaagccgctttccaacgaaggggacttgc
cttgcgatctattcgcgcgccgtgaactcccagacgccgttaaaagacattcttcgccag
cactatccatgggtcgccgactggcagagcgagctgaaggagctgtttgcagcctatgtc
gaggccaagcagatccagaacgtgctcgattacgacgatctcctgctctactgggcgcag
atggtcagcgatcccattctggctgatgatatcggcaaccgtttcgaccatgtgatggtg
gatgaatatcaggataccaaccggctgcaggcctcggtgctgatggcgatgaaacctgct
ggccgcggcctgaccgtggtgggcgacgatgcacagtcgatctattccttccgggccgcg
acggtgcgcaacatcctcgattttccggcatgcttcagcccggcggccgatatcatcacg
ctcgatcgcaactatcgctcgacgcagccgattttggccgccgccaatggcgtcatcgat
ctggcgcgtgaacgttttaccaagaatctgtggacagagcggcagtcgctcgagcgaccg
aagctcgtgacagtgaaggatgaaaccgaacaggcgaatttcatcattgaccagattctt
gccaatcgcgaaaccggcacgacgctgaaacagcaggccgtgctgttccgcacctccagc
cacagcggcccgctcgaggtcgaactcacccgccgcaacattcccttcgtcaaattcggc
ggcctgaaattcctggacagcgcccatgtgaaggacatgctggcggtgcttcgtttcgcg
cagaacccgcgcgaccgcgtcgccggtttccggctgctgcagatgctgcccggcatcggg
ccgaagaaggccggcaatattctcgatacgatagccccagacccggagccgctgcttgcc
cttgccgaaattccaccaccgccgaagaccggtgacgactggacggctttcacacaattg
ctggtggggctgcggcggggccagaacggctggccgggcgaaatcggcttggcgcgcgtg
tggtacgagccccatctcgaacgcatccatgaggatgccgacacccgcaaggccgacctg
cagcaactcgagcagatcgccggcggctatccttcacgcgagcgttttctgaccgagctg
acgcttgacccgccggatgccaccagcgaccaggccggcgtgccgcttctggacgaagac
tatctcagcctctcgaccatccattctgccaagggccaggaatggcgatccgtcttcatc
ctcaacgtggtcgatggctgcataccctccgatctgggggtcggcaccacccaggagctg
gaagaagagcgtcgcctgctctacgtcgccatgacccgcgccaaggacaacctgtcgctg
ataaccccgcaacgcttcttcaccggtggccagaaccagcagggcgaccggcatgtctac
gctgccagaacccgcttcataccggccacattgctgcagtttttcgagacgatgagctgg
ccgctggtttcggctgccgcctcggaacgcagcgcgcagcagatccggattgatgtgggg
gcaaggatgcgggcgatgtggaagtaa
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