Agrobacterium sp. CGMCC 11546: GSF67_16510
Help
Entry
GSF67_16510 CDS
T10431
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc00521
Streptomycin biosynthesis
agrc00523
Polyketide sugar unit biosynthesis
agrc00525
Acarbose and validamycin biosynthesis
agrc00541
Biosynthesis of various nucleotide sugars
agrc01100
Metabolic pathways
agrc01110
Biosynthesis of secondary metabolites
agrc01250
Biosynthesis of nucleotide sugars
Module
agrc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GSF67_16510 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GSF67_16510 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GSF67_16510 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GSF67_16510 (rfbB)
00525 Acarbose and validamycin biosynthesis
GSF67_16510 (rfbB)
Enzymes [BR:
agrc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GSF67_16510 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
QKX00162
LinkDB
All DBs
Position
2:250583..251638
Genome browser
AA seq
351 aa
AA seq
DB search
MRVLVTGGAGFIGSALVRYLVSEVGADVLTVDKLTYAGNLASLKPIENAPNHRFLQADIC
DRAAMNDAFATFQPDYVMHLAAESHVDRSITGAADFIQTNINGTFTMLEAARQYWSSLAD
DAKANFRMLHVSTDEVYGSLGDDGLFEEKTPYDPSSPYSASKAASDHLATAWQRTYGLPV
VISNCSNNYGPFHFPEKLIPLIILNALEGKPLPVYGNGANIRDWLYVEDHARALWLIVQK
GLAGEKYNVGGRNEQKNIDVVNCICSILDELHPQSKPYAELIKYVTDRPGHDARYAIDAT
KLETELGWKAQENFATGIRKTVKWYLDNAWWWQPLREGVYSGERLGVLTKG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttctagttaccggcggcgccggatttatcggctcagccctcgtacgttacctt
gtaagcgaggtcggtgcggatgtcctcaccgtagacaagctgacttatgcggggaaccta
gcctccctcaagcccattgaaaacgcgccgaaccaccgttttctccaggccgacatatgt
gaccgagctgcaatgaatgacgccttcgcgacatttcagccggattatgtgatgcacctg
gccgccgaaagccatgtcgatcgctccataaccggcgccgctgatttcattcagaccaat
ataaacggcactttcacgatgctggaagcagcgcggcaatattggagcagccttgcggat
gacgccaaggcgaacttccgcatgcttcacgtctccaccgacgaggtttatggctcgctc
ggagacgatggacttttcgaggaaaaaactccttacgacccttcgtcgccctattccgcc
tcgaaagccgcaagcgatcatctcgccacggcctggcagcgtacgtatgggcttccggtc
gtgatctccaactgctccaacaattatgggccgttccacttcccggaaaagctcattcct
ctgatcattctcaacgccttggaaggcaagccgctgccggtctatggaaacggcgccaat
atacgcgactggctttacgtggaagaccacgcacgcgcgctttggctcatcgtacagaaa
ggcctcgccggagagaaatacaatgttggtggcagaaacgaacagaagaatatcgatgtc
gtaaactgcatctgctccattctcgacgagttgcacccgcaatcaaaaccctatgcagag
ctcatcaaatacgtcactgatcgccccggtcacgacgcgcgctatgcgatcgacgcaaca
aaactggaaaccgaactcggctggaaagcgcaagaaaacttcgccaccggcattcgcaag
actgtgaaatggtacctcgacaatgcatggtggtggcagccgctgcgtgaaggtgtgtac
tccggagagcgcctcggcgttcttacgaagggctga
DBGET
integrated database retrieval system