Agrobacterium sp. CGMCC 11546: GSF67_20640
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Entry
GSF67_20640 CDS
T10431
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSF67_20640 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_20640 (ruvB)
Enzymes [BR:
agrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSF67_20640 (ruvB)
DNA repair and recombination proteins [BR:
agrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GSF67_20640 (ruvB)
RecFOR pathway proteins
GSF67_20640 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_14
AAA_22
Rad17
AAA_2
AAA_16
nSTAND3
ResIII
RNA_helicase
AAA_17
AAA_18
TsaE
AAA_33
AAA_24
DUF815
NTPase_1
AAA_28
IstB_IS21
ABC_tran
NB-ARC
MCM
Bac_DnaA
Sigma54_activ_2
AAA_7
Cytidylate_kin
NACHT
PduV-EutP
SKI
Motif
Other DBs
NCBI-ProteinID:
QKW99526
LinkDB
All DBs
Position
2:1148133..1149173
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AA seq
346 aa
AA seq
DB search
MSDADRLITPEKRGEDIDTTLRPQSLDDFTGQAEARANLKVFIEAAKNRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFKSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPVRLA
FYTVDELELIVRRGARLMGLNMTDGGAREIARRARGTPRIAGRLLRRVRDFAEVARAEAV
TREIADEALTRLLVDNMGLDQLDMRYLTMIAVNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGFIQRTPRGRILTATAWKHLGLQPPKDLEAAQFRLTLEDD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgcggacagactgattacgccggaaaagcgcggtgaggatatcgacaccacg
ttgcgtccgcagtcgctggatgattttaccggccaggcggaagcccgcgccaatctcaag
gtgtttatcgaggctgccaagaaccgtggcgaggcactcgaccatgtgctgttcgtcggt
ccacccggccttggcaagacgacgctggcgcagatcatggccaaggaacttggcgtcaat
ttcaagtccacgtccgggccggtcattgccaaagcgggcgatctcgcagccctcctcacc
aatctcgaggagcgcgacgtgctcttcatcgacgaaatccaccggctcaacccggcggtg
gaggaaatcctctatccggccatggaggatttccagctcgatctgatcatcggtgaggga
ccggctgcgcgctcggtgaagatcgatctctccaaattcacgcttgtggctgccaccacc
cgtctcggcctgctgacgacacccctgcgcgaccgcttcggcatccctgtgcggctggcg
ttctacaccgtcgacgaactggagctgatcgttcggcgcggggcacggttgatggggctc
aatatgacggatggcggcgcgcgggaaatcgccagacgcgcgcgtggcacgccgcgcatt
gccgggcggcttttgcgccgggtgcgggattttgccgaagtggcacgggctgaggctgtc
acccgcgagatcgccgacgaggctttgacgcggcttctggtcgacaatatgggcctcgac
cagctggacatgcggtatctcaccatgatcgccgtcaatttcggtggtggtcccgtcggc
atcgaaaccatcgccgctggcctttcggagccgcgggatgccattgaggacattatcgaa
ccctatatgatccagcagggtttcatccagcgcacgccgcgcggacggattcttaccgcc
acggcgtggaaacatctcggcctgcagccgccgaaggatcttgaggcggcgcagttccgg
ctgacgctggaggatgattga
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