Agrobacterium sp. CGMCC 11546: GSF67_23670
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Entry
GSF67_23670 CDS
T10431
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc03030
DNA replication
agrc03430
Mismatch repair
agrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSF67_23670
03430 Mismatch repair
GSF67_23670
03440 Homologous recombination
GSF67_23670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agrc03032
]
GSF67_23670
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_23670
Enzymes [BR:
agrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSF67_23670
DNA replication proteins [BR:
agrc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GSF67_23670
DNA repair and recombination proteins [BR:
agrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GSF67_23670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DUF2502
Motif
Other DBs
NCBI-ProteinID:
QKX00079
LinkDB
All DBs
Position
2:1831050..1832030
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AA seq
326 aa
AA seq
DB search
MTSQMDFFAPAAARLPQAERGRKSGGREAVPKAGTDDEALAAHLEATGNYRVLRRLQPRP
IVDRPRPEFPRQGVILDTETTGLDYRTDEIIEIGVITFTFDDQGAIGDVTGIYGGLRQPG
VAIPEDITRLTGITDEMVAGQSIDMVRLTSLIADADLIIAHNAGFDRPFCEAFSPIFRDK
AWACSVSEIDWRVRGFEGNKLGYLIGQSGYFHDGHRAVDDCFALLEVLEQRRSGQDITPF
AELYEASGRSRVRIYAENSPFDMKDHLKKRGYRWSDGSDGRPKSWWVELPGEKLEEELHF
LRTEIYRWDADPTVKHLTAFDRFRAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagatggatttttttgcccccgcggccgcgcggcttcctcaggctgaaagg
ggacgaaagtcgggtggtcgcgaagcggtgccaaaggccggcacggatgatgaagcactt
gccgcgcatcttgaagccaccggcaattatcgtgtcctgcgaaggctgcagccgcgtccg
atcgtcgatcgcccgagaccggaattcccgcgccagggcgtgatcctcgatacggaaacg
acgggccttgattatcgcaccgacgagatcatcgaaatcggcgtcatcaccttcaccttt
gatgaccagggtgcgatcggcgatgtcaccggcatctatggcgggttgcggcagccgggc
gttgccattcccgaagacatcacccgcctgacggggattaccgacgagatggtggccgga
cagtcgatcgacatggtgcgcctgacttcgctcattgccgatgccgatctcatcatcgcc
cataatgccggctttgatcgccctttttgcgaggccttctcgccgatcttccgtgacaag
gcctgggcctgctcggtttcggaaatagactggcgcgtgcgtggtttcgagggcaacaag
ctcggttatctgatcgggcaatcaggttatttccacgacggccatcgcgcggtggatgat
tgtttcgccctgctggaggtgctggaacagaggcgctccggtcaggatatcacgcctttt
gcagagctctacgaagcaagcgggcgttcgcgcgtgcggatttacgcggaaaacagccct
ttcgatatgaaggatcacctgaagaagcggggttatcgctggtccgatggttccgatggc
cggccgaaatcctggtgggtggaactgccgggagagaagctcgaagaggaactgcatttc
ctgcgcaccgaaatctatcgctgggatgccgatccgaccgtcaaacatctcaccgccttc
gaccgcttcagggcgggatag
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