Anthonomus grandis grandis (boll weevil): 126733943
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Entry
126733943 CDS
T08911
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126733943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126733943
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126733943
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
126733943
NCBI-ProteinID:
XP_050293389
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Position
3:7018989..7020983
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AA seq
568 aa
AA seq
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MNPNLRPQQQSFTYKDLLLWKLNYVVFSSVASQLFILVFYVFLIKADPLHPLQWCLATLA
TMTSFSTWIYMIPFLIIIFGQTLICAKAYVLKSSYCSTRFQKFVATFSAHNLVLTFLHVT
VGATLIWLFLSVSGGQYQNLTEVCKGQVYCLNEGTYFLILSGFWTGFYYFVKVYIAEKNL
SFPVVFQRKFLHFKSQLGSIINKSVRQSFWPSFYFSVIYYFYGETFRVGFSNMFGLIQHE
VDPTFFIYFHLWFFTALYYFNMNLMRFYFNLFLTEPVQFPLFKNQMGNLQLQESINNYDY
PIVQNLACLDLYLLAQWQPDRRQVFYTLSNPGQHPHNWNSLVENVLKLLNEYTELLNKTI
DLPEPVKPKQIVQAPSIQGPDRFRNLRNMALVDRDDCYNYVNVQKNPAVEFNLHNNLSDF
LTEKLTKLWNFIKLILGINFLFGELPQANVRKCLANGNLIIWASQGIADITAASLEEDKY
GIVQKDLPIIISGLVNLKQSLDKLNKIPALTRKMVGYDDFNYKMKAAVTAAVKRSLFKIC
IKFGDYMNDIPLSKEISQYLQVHIICKS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctaacctaagaccacaacaacaaagtttcacctataaggacttgcttttatgg
aaattaaactacgtagttttctccagcgtcgcctcacagttgttcatcctggttttctac
gtgttcctgatcaaagccgacccgttacatccattacaatggtgcttagccactctagcg
accatgacatctttcagcacatggatttatatgataccatttctgataattatttttggg
caaacgttgatatgtgccaaagcctatgtacttaaatcgtcgtattgctctaccagattt
caaaaatttgtggccactttctctgcacacaatttggttttgaccttcttgcatgttact
gttggtgcgacacttatatggctcttcttatctgtgtctgggggccaataccagaatttg
actgaagtatgtaaaggtcaagtgtattgcttgaatgagggaacatactttttgatttta
agtggattttggacaggattttattattttgttaaggtgtatattgcagaaaaaaatctg
tcatttccagtagtgtttcaaaggaaatttttacactttaaatctcaattaggatcaata
ataaacaaatctgttaggcaatcgttttggccttcattctactttagtgttatatattat
ttttatggagaaacttttagagttggatttagcaatatgttcggcctgatacaacatgaa
gttgacccgacattttttatctattttcatctctggttctttactgctttgtactatttt
aacatgaatttgatgaggttctacttcaacttgttcctcacagaacctgtacagtttccc
ctattcaaaaaccaaatgggaaatttacaattgcaggaaagcattaacaactatgactac
ccaattgtgcagaatttagcttgtttggatctgtatttgttagcgcaatggcagcctgat
aggagacaagttttttatactttgtcaaatcctggacaacacccacacaactggaactca
cttgtggaaaatgtgctaaagttgttgaatgaatacactgagctgctaaataaaaccatt
gatttgcctgaacctgtaaagcctaaacagattgtacaagcacctagtatccagggacct
gatcgctttagaaatctaagaaacatggctcttgtcgatagagatgactgttacaattat
gtgaatgttcaaaaaaaccctgctgtagagttcaatttacacaataacttatcagatttc
ctgacagaaaaactcaccaaactgtggaattttataaaattaatattaggaataaatttt
ttgtttggggagttaccccaagctaatgtacgtaaatgtttagcaaatggaaacctgatc
atttgggcttctcaaggaattgccgatataacagcagcctcattagaagaagacaaatat
ggaattgtccagaaggatcttcccattatcatatctggccttgtcaatttaaagcaaagc
ctcgacaaactaaataaaataccagcgcttacaagaaaaatggtggggtatgacgatttt
aattataaaatgaaagcggcagtcactgccgccgtaaaacggagtctgtttaaaatatgt
atcaagttcggagattatatgaatgatataccacttagcaaagaaatatctcagtacctt
caggtacatattatttgtaagagttaa
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