Anthonomus grandis grandis (boll weevil): 126734354
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Entry
126734354 CDS
T08911
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126734354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126734354
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126734354
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126734354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
Motif
Other DBs
NCBI-GeneID:
126734354
NCBI-ProteinID:
XP_050293902
LinkDB
All DBs
Position
3:complement(15003092..15009724)
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AA seq
302 aa
AA seq
DB search
MSQKIHIKSASDSTRVGPLAATQKYHRIYTPGEEVIKAATLNFVRGHGTYEENGDLKASV
AGVKEQVNKLISIRPLKSRYNGQVGEVLVGRIMEVQQKRWKVDTNSRLDSALLLSSVNLP
GGELRRRSVEDQHMMRQYLQEGDLISAEVQSVFTDGTLSLHTRSLRYGKLGQGILVKVFP
SLVKKSKIHFHNLPFGVSLILGNNGYIWISPPVTESEGNEGGFVQNLEEVIPKNIREAMA
RVRNCILALSQSHLMLFDTSIIFAYEESLKYSVHELLLPEAMVDIAVLTQHRLSMMEDYE
FQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaaaattcacattaaaagtgcatctgattcaactagggttggacctttagct
gccacccaaaaatatcatagaatatatacaccaggtgaagaagtaattaaagctgcaaca
ttaaattttgtcagaggtcatggaacttatgaagaaaatggggatcttaaagcatcagtg
gctggagttaaagaacaagttaacaagcttatttctattcgtccattaaagagcaggtac
aatggtcaagttggagaggttttagtaggcagaataatggaagtacagcagaagaggtgg
aaggttgacacaaactcaaggctagattcagcattgcttttatcttctgttaatttgcct
ggaggagaattgagaaggcgatcagtggaggatcaacacatgatgaggcagtatttgcaa
gagggtgacttaatcagtgctgaggttcaaagtgtgtttacagatggaactctttcatta
catactagaagcttaagatacggaaagctgggtcaaggtattttagtcaaagtattccca
tccctagtgaaaaaatcaaaaattcactttcacaatttaccttttggagtaagcttaatc
ttaggaaataatggttatatttggataagcccacctgttactgaaagtgaaggaaacgaa
ggtggttttgtacaaaacttggaagaagttattccgaaaaatataagagaggccatggct
agggtaagaaattgtatcttagctttatcccagagccatttgatgttatttgataccagt
ataatatttgcatatgaagagtcccttaaatattcagttcatgagttattattgcctgaa
gcaatggtggatattgctgtgttaacccaacacaggttaagtatgatggaagactacgaa
ttccaataa
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