Anthonomus grandis grandis (boll weevil): 126735318
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Entry
126735318 CDS
T08911
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126735318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126735318
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126735318
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
Peptidase_M18
Motif
Other DBs
NCBI-GeneID:
126735318
NCBI-ProteinID:
XP_050295229
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Position
4:31461974..31530297
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AA seq
670 aa
AA seq
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MGDKDRDEKSPEIITEAERTLAVNALAEFKKKNYTNCLQNINKLEATRPSNFKILHNKAV
VEYYKSDLKKTELFKKNLASICTQFKIKVDKLEEIDYCIAQFNQAVILFHEKQYTSAQRI
MDRVYKFIEPMEENLAKQASLLAIELQLCLRRPDKALTLISYLENNLMYGGSIPLKSLDK
TSKEKKFPLPTAKPIPEDFQKKLLKYKVRCYLLNHSLSIATREIPVLLKEKNKIEALFLS
ANLHYLKGNFDESLKILSCIPEDTLSYTEYGESSRILIYNNLGILYHVMGKPNLACHYFQ
TALKEDIRNCQNLQKKDVNDKQLYICGGSKYHELMYNLGVALLTAGRAAQAFDCLIICVR
RYHRNSRLWLRIAECCIAVHKPSNQVDFDIHKRKKELICDIIGTKDKQKVVLVNTLSNDK
KYNAESQSYAIPVPTLEFASLCLKNAKLLIPENVGETPPEPLFLVPGVTPPAPPPSPTVA
PSSPVASDEIQNLKNGILIATAYVSLCLGDYINGLNHATELLQQEKISGVHKLLGHLYAA
ECLVLSDKIPEAVEHLNPENVKNVGFEFESSASTDDEADVKNNPPFKWFPNNLASAYSVM
QYNLAVAKTIRGQLEQAGHLVKQIWQERLADGQVPAHIIMLIIYIELQLGHAEIARNLLR
RYSFQPRISG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaggacagagatgaaaaaagtccggaaataattactgaggctgaaagaact
ttggcagtaaatgctttggctgaatttaaaaagaaaaactatactaattgtctacaaaac
atcaacaaattagaagctactcgcccatccaactttaaaattttgcacaacaaagctgtt
gtagagtattataaaagtgatctgaaaaaaacagagctatttaagaaaaaccttgcctca
atatgcacacagtttaagataaaagttgacaagttggaagaaatagattattgtatagct
caatttaaccaagcagtaattttatttcatgaaaaacagtatacatcagcacaaaggatt
atggatagagtttataaatttattgagcctatggaggaaaaccttgctaaacaagccagt
ctattagccatagagcttcaactatgcttaaggcgccctgacaaagcattgacgcttata
agctaccttgaaaataatttgatgtatggcggaagtatcccgttaaaaagtttggataaa
acatcaaaagaaaagaagtttcccttgcctactgctaagcccatcccagaggactttcaa
aaaaaattgttaaaatataaagtgagatgctaccttctaaatcactctttaagtattgct
acgagggaaataccagttttgctaaaagaaaaaaataagattgaagcactattcctctcg
gctaatttgcattaccttaaaggcaattttgatgagtctcttaaaattttatcctgtata
cctgaagataccctcagttacaccgaatatggcgaaagttcgagaattttaatatacaat
aatttaggtattttatatcatgttatggggaaacccaatttagcctgtcattattttcaa
actgctttgaaggaagatattcgtaattgccagaatttgcagaaaaaggatgtcaatgat
aagcagctttatatctgtggtggttctaaataccacgagttaatgtataatctaggcgtg
gctctcttgaccgccggtagggcagctcaagcgttcgattgtttaataatttgcgtgagg
agataccacaggaattccaggctgtggctccgtattgctgaatgttgtatagctgtccat
aaaccgagtaaccaagtagattttgacatccacaaacgcaaaaaggagctaatttgtgat
atcataggtacgaaggataagcagaaagtggttttagtcaatactttatccaacgacaaa
aaatacaatgcggagagccaatcgtacgctattccagttcctacattagaatttgcttct
ctttgccttaaaaatgcaaaacttttaattccggagaatgtgggagaaactcctccggaa
ccgctctttttggttcccggagtgacacctcctgcacctccacccagtccaactgtggcc
ccttccagtcctgtggcttcggatgaaattcagaatttgaaaaatggcatactgatagca
acagcatacgtatccttatgtttaggagattatattaacggtctgaatcatgcgacagag
cttttacaacaagaaaaaatatctggagtacacaagcttttggggcatctctatgctgcg
gagtgtttagtgttatcggataaaattccagaagcggttgaacatttaaacccggaaaat
gttaaaaatgttggatttgaatttgagagctcggcttccaccgatgatgaagctgatgta
aaaaataatcctccttttaaatggttcccaaataacttggcaagtgcctattctgtaatg
cagtacaaccttgcagtcgccaaaactatccgaggtcagcttgagcaggcgggtcatcta
gtgaagcaaatctggcaagaacgcttagcggacggtcaagtgccagcgcatataattatg
ttgataatctacattgagttacaattaggacatgcggaaattgccaggaatcttttaagg
cggtactcatttcaaccaagaatttctggatga
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