Anthonomus grandis grandis (boll weevil): 126736294
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Entry
126736294 CDS
T08911
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03013
Nucleocytoplasmic transport
agrg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126736294
03015 mRNA surveillance pathway
126736294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126736294
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126736294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
126736294
NCBI-ProteinID:
XP_050296538
LinkDB
All DBs
Position
5:complement(37963775..37969284)
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AA seq
609 aa
AA seq
DB search
MEGEGNDSVIPGLTQEVSEVLSVQNKDRTSSDNSEYGSVDSLSEDEQPPIAIKVRSKASG
LDSHSESEGSVILQREEGDGQESLPQKKVDDDEDKKNPQYIPKRGTFYEHDDRTAEDDNE
NTEENETEKAEKEGKKKVWQDKGERWSHDRFNDMEQAPKSRAELVAIYGYDIRNEDGPPR
ARRRRRYGRGPNKYTRNWEDEDAYVKPPTPRQKVTKKPVQPETEFPPLVREKKNRSRTKS
SDSNEGDPSNFKENDENKVQNVKSLERQSSVPNEKRSIDRQTNNQLSNDVTHSDNRSNVS
PRVGGTGRIVKPNREIKDSDYKGFTTKTRQTRGVRTDSQKVLPPRKKENNFIQTQNFTNK
SSNNHQIQVADMEKEINKLSLQEKNNKTGAGNYQQSNRQGGSVPPRLQNQAVDQQKGPKR
YSSMRQRSLPETGATPPVPQPTNFTFYPSDYNSTAPPPATTQPILAAQGPVAVSSAPPPP
QLIPAAYPPPQAYAPQAPSAAAFLQTAPPPFISAPPTAPPPQIVSYVTQAPPTFVPGYQG
HTFNTVVQAQPTDLYQPQGGITYYTAEQQVVQRAAPQKRAKAAIPIVAPPTDFKEKEDFN
TETASAVQE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggaaggcaatgattcggttatacctggcttaactcaagaagtttctgaggtt
ttaagtgtacaaaataaggataggacctcttcagacaattcagaatatggtagtgtggat
agcttaagtgaggacgaacaacctcctattgctattaaagtgagatccaaagcatctggt
ttagattcacactcggaatcggaaggtagtgtaattcttcaaagagaagaaggagatggt
caagagagtctcccacaaaagaaagttgatgatgatgaagataaaaagaatcctcaatat
attccgaagcgagggacattttatgagcatgacgatcggacagcagaagatgataatgaa
aacactgaagaaaatgagaccgagaaggcagaaaaagaaggcaagaaaaaagtatggcaa
gacaaaggtgaaagatggtcccatgatcgattcaatgatatggaacaagcaccgaaatcg
cgggcagaattagtcgccatttatggttatgatattagaaatgaagatgggcctccacgt
gccagaaggcgtaggagatacggtcgtggtccaaataaatatactcgaaattgggaagat
gaggatgcatatgtgaaacctcccactccgcgtcaaaaagtcaccaaaaaacctgttcag
cctgaaacagagtttccacctttagttagagaaaagaagaatcgttctaggacaaaatct
tctgattcaaacgaaggagatccttcaaattttaaggaaaatgacgagaataaagtgcaa
aatgtaaaatctttagagaggcaatcttcagttcccaatgaaaaaagatccattgatagg
caaactaacaatcagctaagtaatgatgttactcatagtgacaatagatctaatgtttct
cccagagtgggtggtaccggacgaatcgtgaaaccaaatagagaaataaaggattccgat
tataagggattcacaacgaaaacgcgacaaacacgaggcgtgcgcaccgatagccagaaa
gtgctgccgcccagaaaaaaagaaaacaatttcatccagacccaaaatttcacgaacaaa
agcagcaacaaccaccaaattcaggtggcggacatggaaaaagaaataaacaaattaagt
ttgcaagagaaaaataacaaaacgggggcggggaattatcagcagagtaacagacaaggg
ggcagcgtgcccccacgtcttcaaaatcaagccgtggatcagcagaaggggccgaaacgt
tacagttcgatgagacaacggtctcttcccgaaaccggcgctacgcctcccgttccgcaa
cctacaaatttcactttttatccgagcgattataattctacggctccgcctcctgcgacc
acccaaccgatcctggcggctcaaggacccgttgccgtctcgagtgcaccgccaccgcca
caattaattcccgcagcttatccccctccccaagcttatgccccgcaggcaccgtcggcg
gccgcttttctacagaccgcgccgccgccttttatatccgcaccgccgaccgcgccgccc
ccgcaaattgtcagctatgtgactcaagcgccccccaccttcgttccgggataccaggga
catacgtttaatactgtggttcaggctcagccgacggatttgtatcaaccccagggcggc
atcacttattacaccgccgaacagcaggtggtgcagagggcggctccccaaaagcgtgcg
aaagccgccatccccattgtcgcccccccgaccgattttaaagaaaaagaggattttaat
acggaaacggcatcggcggtacaagaatga
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