Anthonomus grandis grandis (boll weevil): 126737120
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Entry
126737120 CDS
T08911
Name
(RefSeq) endoribonuclease ZC3H12A-like isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126737120
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
126737120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
RuvA_C
zf-CCCH
UBA_N4BP1_C
Lipoprotein_21
Motif
Other DBs
NCBI-GeneID:
126737120
NCBI-ProteinID:
XP_050297818
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All DBs
Position
6:30717797..30756007
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AA seq
678 aa
AA seq
DB search
MSKNAIGTVKIRAACVPFLKENFDRILVLFAAILKEKTRCSNNSENTVVYEVLLSGPEGI
VRTVSADFIPRLQKYVDDICLEGCNLSKTSITGEDSSYDSDCEGYDGAQVLSGSHQDVSR
TASDTLAAEYAEYVQGAQETNPGYNARVEFALKLGYTEKHVQAALQKLGPDPTQNELLAE
LIKLGAQKGGSCDSSPTESLVSDLGLLDRLDLLDVGHTTLRPIVIDGSNVAMSHGNKEIF
SCRGIKICVDWFKARGHKDITVFVPKWRKEAPRPDNPVRDQDILAELERERLLVFTPSRL
VGGKRMVCYDDRYILKLAAQNDGVVVSNDNYRDLCQESAEFRKVVEERILMFSFVNDHFM
PPDDPLGRSGPTLDNFLRGQPKKGDVSGTPPPPPCPYGKKCTYGNKCKYHHPERGPLPHK
SVTERLSEHAQRHLQARESKDGGDIRKNPLGRTRSNVPPPKEPQHAVVSKSRSVDNVGLL
AQSPSYQPIPDAFTFQNTSEKPTLGTFAYQTSSPDNLHRKLQRQLTLNPGGDARLTSVRR
YAPLSPSPLGPPTGYLGTSGWDVHQGVTRIASAPDSCRSGQTAQQSGWHGLQGIQHGQTA
PVRHMHRMSSSSDSQLNVWPGQQWNPIGNQEDERRKLHYHLSAIFPEEQVIQAMQMYPDE
TNAQKICAAILAMFSAKT
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaacgcaatcggtacggtaaaaatcagagcggcctgcgtaccgtttctgaaa
gagaacttcgacaggattttggttctctttgcggctattttaaaagaaaaaacccgatgt
agtaataatagtgagaataccgtggtttacgaggtacttcttagtggtcccgagggaata
gtaaggaccgtaagcgcagatttcattcccagacttcagaaatatgtagacgatatctgc
ttagaaggttgtaacttgtctaagacttccattaccggcgaggattcttcctatgactcg
gactgtgagggatacgacggagcccaggtactatctgggagccatcaggatgtttctaga
acggccagtgatactttagctgcggaatatgcggagtatgtccaaggtgcccaggaaacc
aatcctggatataatgcgagggtggagtttgcactgaaactaggatacaccgagaagcat
gtccaggcagcgttacaaaaactgggaccagaccctactcagaatgagctgctggcagaa
ctgataaaactaggcgctcagaaagggggatcgtgtgatagcagtcccactgagagtctt
gttagtgatttaggactattagataggcttgatctactcgacgtcggtcatacaacttta
cgacccatcgttatagatggcagcaacgttgcaatgagccatggaaacaaggagatattt
tcctgtcgcgggatcaagatatgcgtcgactggtttaaggctcgtggtcacaaagacata
acagtgttcgtgccaaaatggcgaaaagaggcgccccgtccagacaacccggtgcgagac
caagatattttggctgagctagagcgagaaagactgttggtttttacaccgtcaagacta
gtaggtgggaagcgaatggtatgctatgatgacaggtacattttgaaattggccgcacaa
aacgatggcgtagtagttagcaatgacaactatagggacctttgtcaggaaagtgcggaa
tttagaaaggttgttgaagaaagaatattgatgttctcttttgtcaatgaccactttatg
ccgcccgacgatcctttgggtagatctggacctactttggacaattttcttcgtgggcaa
ccaaaaaagggtgatgtaagcggaacacctccgccacctccatgtccttacggaaagaaa
tgcacttacggtaataagtgtaaatatcaccatcctgagagaggaccgttgcctcacaag
agtgtgacggagagattgtcggaacatgcccaaagacatttgcaagctagggaaagtaaa
gacggcggagacatccgaaaaaatcctctgggccgtactcgttccaacgtaccgccaccg
aaagagcctcaacacgcggtcgtatcgaagtcacgtagcgtagacaacgtgggacttttg
gcccaatcgccgtcttatcaaccgattccagacgcgttcacgtttcagaacacctccgaa
aaacccaccctgggcacttttgcgtatcaaacatcgtcaccggataacctgcacaggaag
ttgcagaggcagttaacgttaaatccgggcggcgatgcgagactgacgtccgttaggagg
tacgcccctcttagtcccagtcctctgggccctccgacgggttatctcgggacttccggg
tgggatgtgcatcagggggtaacaagaatagcgagcgcgccggattcttgccggagcgga
caaactgctcaacaaagcggttggcatggtttgcaagggattcaacacgggcaaacggca
ccagttagacacatgcaccgtatgtctagttcctcggactctcaattaaacgtgtggccc
gggcaacagtggaaccccattggcaaccaggaagatgaacgtcgcaaacttcattatcac
ttatccgccatatttcctgaagagcaagtcattcaggcgatgcaaatgtatccggacgag
acgaacgctcagaaaatatgcgccgctattctagcgatgttctctgctaaaacgtaa
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