Anthonomus grandis grandis (boll weevil): 126737227
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Entry
126737227 CDS
T08911
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2 isoform X1
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
agrg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126737227
09123 Folding, sorting and degradation
03018 RNA degradation
126737227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126737227
03041 Spliceosome [BR:
agrg03041
]
126737227
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126737227
mRNA degradation factors
5'-3' decay
Lsm complex
126737227
Spliceosome [BR:
agrg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126737227
Complex C
U2 snRNP components
126737227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
126737227
NCBI-ProteinID:
XP_050297972
LinkDB
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Position
1:complement(41722837..41727495)
Genome browser
AA seq
126 aa
AA seq
DB search
MAYKHTHNFVINIFHNYGSTISYAAEVPKMVLLFYSFFKSLVGKDVVVELKNDLSICGTL
HSVDQYLNIKLTDISVTDTDKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKE
ASAPTR
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggcttataaacacacacacaattttgttataaacatttttcataattatggatctact
atatcctatgcagcggaagtacccaaaatggtcttgcttttctattctttctttaagtca
cttgttggcaaggatgtggttgtggagctgaaaaatgacctaagtatatgtggaactctt
cattcagtggaccagtatttaaacatcaaacttacagatataagtgtgacagatacagat
aaatatccacacatgctgtctgtaaagaattgctttataagaggatctgtagtccggtat
gttcaactgccagccgacgaagtggatactcagcttctacaagatgccgcgaggaaggaa
gcttctgcaccaacaagataa
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