Anthonomus grandis grandis (boll weevil): 126737814
Help
Entry
126737814 CDS
T08911
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06236
collagen type I alpha
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg04512
ECM-receptor interaction
agrg04518
Integrin signaling
agrg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126737814
04518 Integrin signaling
126737814
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126737814
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
agrg00536
]
126737814
Glycosaminoglycan binding proteins [BR:
agrg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126737814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
New_glue
VWC2L_2nd
Archease
Motif
Other DBs
NCBI-GeneID:
126737814
NCBI-ProteinID:
XP_050298830
LinkDB
All DBs
Position
6
Genome browser
AA seq
1590 aa
AA seq
DB search
MKFQLYLLVALAATIILDVTDARVRRKKVKKQPSSTTESLPETTSEETVHQEDAPTKLSL
DTADLEISEQEVSSEQVLKKSKKGGKRRAVKRKVDGVQNQEPSDDYNPDYGDYGENYAEY
NEVKVAGVTERITTPQPYDERPRFVETSIRPIGINTTPSPRGNVQVSVIEPSPESHIGAI
NDCRQDGKFYQDNQKWTIGECTNCTCIRGTVDCKTDESCLQGLKPREPQIDDTYPISGPR
GEAGYPGEQGRPGDSGIPGSPGTPGVPGPPGPPGSIPDLTAYYAQLAAANSANDKGPQIV
EPFQYLQAQVGPTGSRGPPGPPGAAGPQGFQGTRGEIGEPGLPGPMGPAGLRGPPGPPGK
DGERGEDGESGAVGATGPPGSRGLPGIPGLPGAKGHRGYPGLDGTKGEQGPQGEKGGQGI
PGFVGPIGPSGTPGPRGERGREGPPGPPGLRGLDGVAGPPGPAGSVGKPGPPGFPGIPGA
KGDQGAIGPQGNQGLQGPRGEQGRPGEPGETGPSGPPGKDGYPGEKGATGSPGLVGPPGF
PGSRGPPGNDGHPGIPGAKGLPGQPGERGYKGETGPKGEIGSPGLRGLPGPSGPEGKRGR
RGNRGPPGPNGPQGERGIPGITGLPGPDGAPGPKGQAGERGAVGPQGIKGAQGEMGRTGA
MGLQGLRGLTGRTGAAGKTGPPGERGLPGQDGKPGEPGVQGIQGIPGPIGLPGDKGLTGA
PGKDGESGPQGPPGPKGDVGKDGLRGPQGLPGIPGNDGERGPPGVTGPRGFQGLPGAPGN
PGQPGKDGEVGLQGPPGVPGPSGMRGERGFPGERGPVGQPGATGQKGSTGAQGLDGPAGL
PGPRGMKGHQGPQGLIGLPGLRGVPGSQGEKGERGAFGPIGPEGPPGRQGERGPIGPLGP
PGPPGEPAAPGEPGTPGSTGEPGAPGTPGDRGPVGPSGPQGFPGPPGLVGLPGPKGERGT
SGLKGEQGNPGHIGRPGEPGLQGPVGLTGAKGARGEPGQRGDVGLMGPPGRPGDQGPAGH
PGSTGSPGPAGLPGIKGCHGDQGKPGNSGPPGLPGIPGVEGPKGESGSDGPPGIAGPVGP
QGPAGDRGLPGLPGAPGLPGQQGHRGTPGEQGIPGKPGNEGPIGPQGIAGPPGPTGPHGD
QGPEGPPGKMGVPGLPGRPGDKGPVGPPGQTGPNGPPGLPGPMGLAGPIGLTGERGPRGE
PGPQGTEGRPGERGKQGAPGIEGPKGERGEVGPKGAKGHTGLMGLQGLPGAQGPPGEKGM
TGSPGLPGKDGDTGPRGLPGHDGSPGLPGLMGPQGLRGETGSDGRPGPPGNPGPPGPPGP
PGDGIGYDAASLAAILANANTQKGPDPQGDQPYVPRVFGKELTNEETRELINKAYEQLKA
SFEKYKRPNGEKNNPGKTCRDIWAAYPDSPSGQYWINPNGGDVKGAILVHCDMETKSSCI
MPSPTRSQELSYIGTDPEIWLGEIDKGIKIYYKADSTQIGYLHLLSSRATQNITYHCLNS
VAYYDVQRHTYRKGIKLMSYNDMEITPKGAKLKYEAIIDECKHRPATWAKSVLQYNTDKP
SRLPITDIGIRDIGKPNQAFWVEIGAVCFS
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccaactatacctactagtagctctagcagcaactattattttggacgtaaca
gatgccagggttcgcaggaaaaaggtaaagaagcaaccttcttctacaactgaaagtcta
ccagaaacaacttcagaagaaaccgtgcaccaagaagacgcacctacaaaacttagttta
gatactgccgatttagaaataagcgaacaggaagtttcgtcggagcaggtcctcaaaaaa
tctaaaaaaggtggaaaacgtagggctgtaaagaggaaagttgacggtgtccagaatcaa
gaaccaagtgatgactataatcccgattatggagactacggtgaaaattatgccgaatat
aatgaagtaaaagttgcaggtgtaacagagcgaataactactccccaaccttacgatgaa
cgaccaagatttgtagaaacatcaattagacctataggtataaatactactccaagccct
agaggaaatgttcaagtaagtgttattgagccatcacctgaaagccatattggggccatt
aatgactgcagacaagatggaaaattttaccaagacaaccaaaaatggacaataggagaa
tgtaccaactgcacctgtatccggggaacagttgactgcaaaactgacgaaagttgttta
caaggtttaaagccaagggagccacaaatcgatgatacctacccaatttcaggacccagg
ggggaagcaggttatccaggagagcaaggtcgtccaggagactcggggattccaggctca
ccaggcactccgggggtcccaggacctccaggtccaccaggatcaattcctgaccttact
gcgtactatgctcaactggctgctgctaattcagctaacgataaaggtcctcagatagtg
gagccttttcaatacctgcaagcacaggtgggaccgacgggctctagaggtccaccaggt
cctcccggagctgcaggtccccaagggtttcaaggaaccagaggcgaaattggagaaccg
ggattgccgggacctatgggaccagctggactaagaggtccacctggaccaccaggcaaa
gatggtgagcgaggagaagatggggagtctggtgcagttggagctacaggtcctcctgga
tctagaggattgcctggtattccgggacttcccggagcaaaaggccaccgtggttaccct
ggacttgatggcaccaaaggcgaacaaggaccacaaggtgaaaaaggtggacaaggaatt
cccggttttgtcggtcctattggcccctccggtacacctggaccaagaggagaaagaggt
agagaaggacctccaggacctcctggcttaagaggacttgatggtgtagctggaccacct
ggcccagcggggtctgtgggtaaaccggggccacctggctttccaggaatacctggagca
aagggagatcaaggagcgattggtcctcaaggaaatcaaggcttacaaggtcctagagga
gaacaaggacgtcccggtgaacccggtgaaactggaccctctggtcctcctggaaaagat
ggatatcccggtgaaaaaggggccacaggatcgccaggactagtgggaccaccaggtttt
ccaggatcaagaggccctcctggaaacgacggtcatcctggaattcctggagccaagggc
ctacctggtcaacctggagaaagaggttacaaaggagaaacagggccaaaaggagaaatt
ggctccccagggttgagaggtcttcctggaccttcaggacctgaaggaaaaaggggaaga
aggggaaacagaggtccaccaggacccaacggaccacaaggcgaacgtggtattcctgga
attactggattacctggacctgacggcgcacccggccccaaaggacaagctggtgaacga
ggtgctgtaggaccacaaggcattaaaggcgcacaaggagaaatgggacgtaccggagct
atgggtcttcaaggtctcagaggcttaacgggaagaactggtgcagctggaaaaacgggg
cctcccggtgaacgtggattaccaggccaagatggaaaacctggtgagccaggagtacaa
ggtattcaaggaattccaggacctattggtttacctggtgataaaggattaactggtgca
cctggaaaagatggagagtcaggtcctcaaggaccacccggtcccaaaggtgatgttggc
aaagacggtttacgaggtccacaaggacttcctggtattccaggtaatgatggcgaaaga
ggtcctccaggtgttactggacctcgaggattccagggcctacctggagcacccggtaat
ccaggtcagccaggaaaagatggagaagttggtctgcaagggccgccaggagttcctgga
ccatcaggaatgagaggggagagaggttttcctggagaacgtgggccggtaggacagcct
ggcgctacaggacaaaaaggatctactggagctcaaggattagatggacctgcgggctta
ccaggtccaagaggaatgaaaggtcatcaaggtccgcaaggtcttataggattaccaggc
ttgaggggtgtacctggatcacaaggagaaaagggcgaaagaggcgcatttggtcctatt
ggacctgaaggacctcctggtcgacagggagaaagaggacctatcggtccattaggcccg
ccaggtccaccaggcgaaccagctgcccctggagagcctggtacaccaggatctacagga
gagccaggagctccaggaaccccgggagatagaggaccggtcggaccaagtggtccccaa
ggattcccaggaccacctggtctagttggcttgccaggccctaaaggagaaagaggaaca
tcaggattaaagggtgaacagggaaaccccggccacataggtcgtcctggagagccagga
ttacaaggtcctgttggtctaacaggtgcgaaaggcgcaagaggtgaacccggtcaacgg
ggagacgtagggttaatgggtccaccagggcgaccaggagatcaagggcctgctggccat
ccaggcagtacaggttcacccggtcccgctggccttccaggaattaaaggatgtcacggt
gatcagggtaagccaggaaatagcggacctccaggtttaccaggtataccaggtgtggaa
ggccccaaaggagaatcaggttcagatgggcctccaggtatagccggacccgtcggcccg
caaggacctgctggtgacagaggtttgcctggactacctggtgcgcctggtttaccgggt
caacaaggacaccgtgggactcctggagaacagggtataccaggaaagccaggaaatgaa
ggaccgataggtccccaaggaatagcaggaccgccgggaccaacaggaccacatggagat
caaggacctgaaggcccacctggaaaaatgggagttcctgggttacctggacgacctggc
gacaaaggaccggtaggacctcctgggcaaacaggtccaaacggcccacctggactgccg
ggaccaatgggattggcgggtcccatcggtcttactggagaacgcggtcctagaggagaa
ccaggaccacaaggaaccgaaggacgaccaggcgaacgtggtaagcaaggagcacctggc
atagaaggtccaaaaggagaaagaggtgaagtaggtcctaaaggagctaagggccatact
ggacttatgggcttacagggcttaccaggagcacaaggtcctccaggagaaaaaggtatg
acgggttctccaggtctaccaggaaaagatggcgatacaggtcctcgaggtctacccggt
cacgatggtagcccaggcttacctggattaatgggtcctcaaggtttaagaggtgaaact
ggttctgacggaagacctggcccaccaggaaatccaggccctcctggaccacccggacct
cctggagatggtattggttacgatgcagcatctctggcagcaatattggcaaacgcaaat
actcaaaagggccctgatccacagggcgatcaaccctatgttccaagagtttttggcaag
gagctgacaaatgaagaaactcgagaattaattaacaaagcttacgaacaactgaaggct
tcattcgagaaatataaaagacctaacggcgagaagaataatcctggaaaaacttgtaga
gatatttgggcggcttatcctgattcacctagtggccagtactggattaatccgaatgga
ggtgatgttaaaggagcaattctggtacattgtgacatggaaacaaaatcgtcatgtata
atgcctagtcccacgagatcacaagaactttcgtatattggtacagatccagaaatttgg
ttgggagagattgataagggaattaagatttactataaggcagattctacccaaataggt
tatttacaccttctatcttctagagccacacaaaatattacttatcactgtctaaactca
gttgcctattatgatgttcagagacatacttacagaaaaggaataaaactcatgagctat
aatgatatggaaattactcctaagggagccaaactaaaatacgaggcaattattgatgaa
tgcaagcatcgtccagctacttgggccaagtcagttctgcaatataataccgataagcct
tctaggctaccaataacagacatcggtattcgtgacatcggcaaaccaaaccaggcattt
tgggtggaaattggagcggtatgcttttcctaa
DBGET
integrated database retrieval system
