Anthonomus grandis grandis (boll weevil): 126737962
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Entry
126737962 CDS
T08911
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126737962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrg03041
]
126737962
Spliceosome [BR:
agrg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126737962
Complex C
U5 SnRNP specific factors
126737962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_HPS5
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
126737962
NCBI-ProteinID:
XP_050299054
LinkDB
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Position
6:complement(11617739..11622207)
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AA seq
349 aa
AA seq
DB search
MVIENKRKADDSALVPVQKKSRNDVALTNKNKQLAQLQPAPARTSNLFAPIMVCEGHEGE
IFTVDFHPEGQYFATSGFDRKIFLWSVYGECENISVMTGHTGAITELHFNTDGTNLITAS
TDYTLGLWDIVTAQRIKKYKGHTTFVNCAQPSRRGPQLIVSGSDDTTVKIWDQRKKIPTM
TLNATYQTTAVSFSDTAENVFSGGIDNDIKVWDLRNKELLYTMKGHTDTITGLSLSADGS
YLLSNSMDNTLRIWDVRPYAPIERCVKVFSGHQHNFEKNLLRCAWSPDGNKVSGGSADRF
VYVWDTTSRRIIYKLPGHTGSVNSVAFHPNEPIIASGGSDKIVFIGEID
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggttattgaaaataagagaaaagctgatgactcagctctagttccggttcaaaaaaaa
tcccgaaatgatgtcgcccttaccaataaaaacaaacaacttgcccaacttcagcctgca
ccggcacgtacctcaaacctttttgctccaattatggtgtgtgaagggcatgaaggtgaa
atattcacagtagactttcatccagagggacaatattttgctacttcaggttttgataga
aaaatatttttatggagtgtatatggagaatgtgaaaatatctcggtcatgactggccat
acaggggctataacagaacttcattttaatacagatggcacaaatttgatcactgcatct
acagattatactctgggactttgggatattgtgacagcacagagaattaagaaatataag
ggtcatacaacatttgtaaattgtgcccagccctcaagaaggggtccacagttgattgtt
tcaggtagtgatgatactactgtaaagatttgggaccaaagaaagaaaatacctactatg
actctaaacgctacctaccaaactactgcagttagtttcagtgatactgctgagaatgtt
tttagtggtggtattgataatgatattaaggtttgggatctaagaaataaggaattgctt
tatacaatgaaaggccatacagacacaataactggattgtcattgagtgccgatggatct
tatttacttagcaattctatggataatacattaaggatatgggatgtaaggccatatgca
cctattgagagatgtgtaaaagtttttagtgggcaccaacataattttgagaaaaattta
ctgagatgtgcatggtctccagatgggaataaggttagtggcggttcagcagacagattt
gtctatgtgtgggacactacatcaagaagaatcatttataaattaccgggacatacaggg
tctgttaacagtgtggcatttcatccaaatgaacccattattgcttctggtggaagtgat
aaaatagtgttcattggagagattgattga
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