Anthonomus grandis grandis (boll weevil): 126738645
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Entry
126738645 CDS
T08911
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126738645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrg03400
]
126738645
DNA repair and recombination proteins [BR:
agrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
126738645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
AAA_14
Motif
Other DBs
NCBI-GeneID:
126738645
NCBI-ProteinID:
XP_050300026
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All DBs
Position
7:complement(14750085..14762491)
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AA seq
921 aa
AA seq
DB search
MGDQELQALNMDINQQQSFVRYFRNLPQKAASTVRLFNRTDFYTLHEEDAKLGADFTSKI
IKYMGETPKLSYVCINKNQMEALVRELLLIRQYRVEIYVKTPGKNNDFQLEYNGSPGNLT
QFEQILFENNTIDSSNSVMGLKIGKNNRTIAVSNVNTTDLTIEVSEFIDNECFTELEGLL
AQVSPRECIIPSSGGPELNNIKAILEKNGILVAQLKKSDFDSSDITQDLNRLLFFQVGKE
KKAEIFPETNLKDAMDCLQAVIKFLNLTGSQSNFNQYKIGTIDIKRYVRVDNAALYALNI
LPKPSFNEEGAPVFTNIPKNHNLIGILNHCVTPQGRRLLEQWIKQPLKDLNLINERLDVV
ECLIKDSEIRRIISKDALTKMPDLMLLSKKLWSKKAKLQDCYRLYQAINYLPGLLYTLRK
LENRSIKDVFINPLGEFITDMEKYQSMIETMLDLNLVDRHEFLIKSNVNPEINELAKSKN
AIEEKMQKLLKKAANDLGLEEGKSIKLENNPQHGYFFRITKKEEQALRQAKSYKIIDAVA
GGVRFNTEKLIILNEEYSSLNEKYEELQKELVDEMIKVAAGYADTVKSINVILATLDVLT
SFAIAATSAKVPYVRPVMKPINQQVLKLTKVRHPCLEQQDQLEFIPNDVNFDQLDKTFYI
ITGPNMCGKSTYIRSVGVCVLMAHIGCWVPCDYAEISLVDGILARVGASDSQVKGLSTFM
LEMIETATTIKSATKNSLIIIDELGRGTSTYDGCGIAWAIAEYLATEVKCFSLFATHFHK
ITKLADTCSSVGNLHVTAVTTHNAITPLYQVKEGECDKSYGIHCAKIADFPHDVLKWATE
NLSELEHHEGMALIKDYEIPLKKKIIEEGDKTVKLALKALKQGIDEGKKEENLEQLVGKV
RNEMEISDNKFIKGLLSHQSN
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccaagaacttcaagctctaaacatggatataaaccagcaacaaagctttgtt
aggtattttcgaaacttgccacaaaaagctgcctccactgtacgattgtttaatagaacc
gacttttatacattgcatgaagaagacgcgaaacttggagctgattttacgtcgaaaatc
atcaagtacatgggtgaaactcccaagcttagctatgtatgtatcaacaagaatcaaatg
gaagcactagttagggaactcttacttatcaggcagtatagagtggaaatttatgtaaaa
actccaggaaaaaataatgactttcaattagaatataatggttcacctggaaatcttact
caatttgagcaaattttgtttgagaacaatacaatagactcatccaattctgtaatgggc
ttaaaaataggtaagaataatagaaccattgctgttagcaatgttaatacaacagattta
accattgaagtatcagaatttattgataatgaatgttttactgagttggaaggtttgctt
gctcaagttagcccgagggaatgtattatacccagtagtggtgggcccgagttaaacaat
attaaagcaatccttgaaaaaaatggtattttagtagctcaactcaagaaaagtgacttt
gactcatcagacattacgcaagacctaaataggttattgtttttccaagtaggcaaggaa
aagaaagcagagatatttccagaaaccaacctcaaagatgccatggattgtttgcaagct
gtgataaaatttttgaaccttactggcagccagtctaattttaaccagtataaaattggg
acaattgatattaaaaggtatgtgagggtagacaatgctgctctttatgcattaaacatt
ttgccaaaacccagttttaatgaagaaggtgccccagtatttaccaatattcctaagaat
cataatctcataggaattttgaatcattgtgttacacctcaaggaagaaggttattagaa
cagtggattaagcaacctctaaaggatctcaatctcatcaatgaaagactagatgttgtg
gaatgtttgatcaaggattcagaaatcagaagaattattagcaaagatgcattgacaaaa
atgcctgatctgatgttattgtcaaaaaagttatggagtaagaaagcaaagttgcaggat
tgctatcgtttatatcaggctataaactatctaccaggacttctatatacattgagaaaa
ttggaaaacaggtctattaaggatgtatttataaaccctcttggtgaatttataacagat
atggagaaatatcaatctatgattgagaccatgttggatttgaatttagttgacagacat
gagttcttaataaaaagtaatgttaaccctgaaatcaatgaattggcaaagtcaaaaaat
gccattgaagaaaaaatgcagaagttacttaagaaggctgccaatgatctggggttggaa
gagggtaaaagtattaagctcgagaacaatcctcaacatggatatttctttagaataact
aaaaaagaagaacaagctttaagacaggctaaaagctacaaaataatagatgctgtagct
ggaggtgtgcgtttcaatacagaaaaattaattattcttaacgaagaatattcatcacta
aatgagaaatatgaagaattacagaaagaattggtggatgagatgataaaagttgccgct
ggttatgctgatacagtaaagagcattaatgtcattttagcaacactcgatgtcctgaca
tcctttgccattgctgctactagtgctaaggtaccttatgtgaggcctgtgatgaaacct
ataaatcagcaagttctaaaattaacaaaggtacgccatccatgcctggaacagcaagat
cagctagagtttatcccaaacgacgttaatttcgatcaattagacaagacgttttatatc
atcaccggcccaaatatgtgcggaaaaagtacatacattcgttcggtaggtgtgtgcgtc
ctaatggctcacattggctgttgggtaccctgcgactatgcagaaatatctctagttgat
ggtatccttgcgagagtaggcgctagtgacagtcaagtaaaggggttatcgacttttatg
ttggaaatgattgagaccgccaccacaatcaaaagtgcgactaaaaactccttaattatt
attgatgagcttggtagaggtacttctacatatgacggatgcgggatagcttgggcgata
gcagagtatctcgccactgaagttaagtgtttttcactatttgccacacattttcacaaa
atcactaaattagctgatacgtgttcaagcgtagggaatctccatgtgactgctgttact
acccataatgctataactccactatatcaagtaaaggagggagaatgcgataagagttac
ggaattcactgtgctaaaatagcagattttcctcatgatgttttaaaatgggcaactgag
aatttaagcgagttggagcatcatgaaggcatggcgttaattaaggattatgagattcct
ctgaagaagaaaataattgaggaaggggataaaacggttaaattagccttaaaagctttg
aaacaaggaattgatgaaggtaagaaggaagaaaatttggaacaacttgtggggaaagta
agaaatgaaatggaaataagtgataataaatttataaaaggattgctaagccatcagtca
aactaa
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