Anthonomus grandis grandis (boll weevil): 126738698
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Entry
126738698 CDS
T08911
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03022
Basal transcription factors
agrg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126738698
09124 Replication and repair
03420 Nucleotide excision repair
126738698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrg03021
]
126738698
03400 DNA repair and recombination proteins [BR:
agrg03400
]
126738698
Transcription machinery [BR:
agrg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126738698
DNA repair and recombination proteins [BR:
agrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126738698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
NUP120_helical_2
Motif
Other DBs
NCBI-GeneID:
126738698
NCBI-ProteinID:
XP_050300094
LinkDB
All DBs
Position
7:13986455..14013628
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AA seq
548 aa
AA seq
DB search
MSTSSEDVLLQVPSVRYKKGDGSLFLMDQRLIWMVEHRDTVVVSHSYADIKSQKISPEGK
AKVQLQVVLHNGVSSTFHFTNTKGLQAQLADRDKIKDMLQTLLPKFKRKVDKELEEKNNL
LSTNPILFQLYKDLVMTEVVSSEEFWTQHAQQHLQKKKQAPQEIGVSGAFLADIKPQTDG
CNGLKYNITPDIIECIFKTYPAVKKKYLENVPNKLTEAQFWTKFFQSHYFHRDRKYAENK
DLFTECGKIDDQELKKDIQAGVKDPLVNLTEFEDKTLEEGYGTSAEKPSSTIGTASQAMI
KRFNQHSIMVLKATKNKAHDTQSSEGSQQVSDSSSFEAAGEPINKKQKILEKITYDDLEG
EDNQKNGNVHLNLSKVERYLHGPMPDAGGEHINSNESAHLTRSVLQEARQWQARPHAPNF
NLVTPSAAIMALGDLSPGGALMRGFQEQSLAQLVPPHIEKDLRNLYLALCELLSHFWKAF
PPTTPNGEQHLIKMNEALQRFQTVKLKPFEAKLIRELTPLSQQLTKHLNQLLNAAYQKFS
TWQKMKAR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctcaagtgaagatgtattattgcaagtgccaagtgtcagatataaaaaaggt
gatggaagcctttttctaatggatcaaaggcttatttggatggtggaacacagggacact
gttgtagtttcacactcatatgctgatattaagtcccaaaaaatctcgccagaaggaaaa
gccaaagtacaacttcaagtcgtcctacacaatggagtctcttctacatttcatttcacg
aataccaagggtctacaagcacaattggccgacagagataaaattaaagatatgctacaa
acattactacccaaatttaagagaaaagttgacaaagagctagaagaaaaaaacaatttg
ttgtcaactaatcccattttgttccagttgtataaagatttggttatgactgaggtagta
agttctgaagagttttggactcagcatgctcagcaacatttgcagaagaaaaagcaagct
ccacaagaaattggagtttctggcgcattcctagcagatatcaagccacaaactgatggc
tgtaatggtctaaaatacaatattacccctgatattattgagtgcattttcaaaacatac
ccagctgtgaagaagaaatatttagaaaatgttcccaataaattaactgaggctcaattt
tggactaagttttttcagagtcactattttcacagagatcgaaaatatgcagaaaataaa
gacctattcaccgaatgtggtaaaatcgatgaccaagaattgaaaaaagatattcaagca
ggagtaaaagatcctctagtcaatctaactgagtttgaagacaaaaccctagaagaaggt
tatggaacaagtgcagaaaaaccttctagtactattggtactgctagccaagcaatgatt
aagaggtttaaccagcattctattatggtattaaaagcaacgaaaaataaagcacatgat
actcaatcttctgaagggtctcaacaagttagtgacagtagtagctttgaagcggcgggc
gaacctatcaacaaaaagcaaaaaattttggaaaaaatcacgtatgatgatctagaaggg
gaggacaaccaaaaaaatggaaatgttcacttaaacttgtcaaaggttgagagatatctt
cacggtccaatgccagacgcaggaggtgaacatataaattccaacgagtctgcgcatttg
acgcgcagcgtcttacaagaagcgagacaatggcaagctagaccgcatgcgccgaacttt
aatctagtgacgccttcagctgccattatggccttgggagatctgtctccaggtggtgcc
cttatgaggggattccaagaacagtctcttgcacaactagtaccgccacatatagaaaaa
gacttgaggaatctatatttagctctgtgcgagcttttgagtcatttttggaaagcattt
ccgccaaccactccgaatggggaacagcaccttataaaaatgaatgaagctttgcaaagg
tttcaaactgtgaagctaaaaccctttgaggcaaaattaattagagaattgactcctctt
tcgcagcaactgacaaaacatcttaatcagctcctaaatgcggcttatcaaaaatttagt
acttggcaaaaaatgaaagccaggtag
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