Anthonomus grandis grandis (boll weevil): 126739556
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Entry
126739556 CDS
T08911
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126739556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126739556
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126739556
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126739556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
126739556
NCBI-ProteinID:
XP_050301257
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All DBs
Position
8:14847101..14867533
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AA seq
679 aa
AA seq
DB search
MAASRKLQGEIDRCLKKVTEGVDTFEDIWQKVHTAANSNQKEKYEGDLKKEIKKLQRLRD
QIKSWIASGEIKDKSVLMENRKLIETQMERFKVVERETKTKAYSKEGLGGAQKIDPAQKE
KEEMQHWLSTSIDELSIQTDSFESEIEQLLSKGKKKLDKDKQERMEELKSRLERHRFHIQ
KLEALLRMLDNESVEVKQIKPIKDNVDYYIEAWKDPDFEDNEFIYDDIIGLDEVELSGVG
LPSSVTTDSIDTAGTPTSVISGSSPVATSPAPLIASNGGGAVAAPIPLNHSTDLIFLPEE
KKAVQKEVQPPQSKPVKPTAVRASVLSLNTSVNSVLNYSSASAASTPAGKGKTIAASSTP
NKPTVTPAAREPSPVMTNMTTIGNFAAVAANNLNKTVNTSTEAPPAPTQQQQTAPCPAPT
APKPSNDVAPTTENILNQTTHLLNSVTAPPQQVPTVPENVQTIPNGSVDEKISEGMSTLK
TMAQQVIDRAGLDSQPQHQPQVILEPPRSQNQAKTEAHIPPLLGVAPLGAVPLQKEHQLQ
FQLMEAAYFHMPHPSDTERIRTYLARNPCNTPSYYIQTPLFNSDTPEFYQRLGTETLFFV
FYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYEQGTYIYFDYEKWGQ
RKKEGFTFEYKYLEDKDLN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccgctagtaggaaactacaaggggaaatagatcgatgcttaaaaaaagtaacagag
ggtgtcgatacttttgaagacatctggcaaaaggtccatactgcagcaaacagcaatcag
aaggaaaaatatgaaggtgaccttaagaaggaaatcaagaagttgcaaagacttcgagac
caaattaaaagttggatagcttcaggagagatcaaggataagagcgtccttatggaaaat
aggaaacttattgaaactcaaatggagaggtttaaggttgttgaaagagaaacaaaaact
aaagcatattcaaaagaaggacttggaggagcacaaaaaattgacccagcacagaaagag
aaggaggaaatgcaacattggttaagcacatcaatagatgagctatcaatacagactgac
tcctttgaaagtgaaatagagcagctattgtcaaaaggcaagaaaaaactggacaaagat
aagcaggaaaggatggaagaactgaaaagtaggttagagaggcataggtttcatatacaa
aaactagaagcacttttacgaatgctagataatgaatctgtggaagtcaaacaaataaaa
cctataaaagacaacgtggattactatatagaagcttggaaagacccagactttgaagac
aatgaattcatctatgatgacatcattggtttggatgaagttgagcttagtggagttgga
ttgccttcatcagtgacaactgacagtattgatacagcaggaacgcccacctctgtgata
tccggatcttcgccggtggcgacatcgcccgcccccttgatcgcctccaatggagggggc
gccgttgccgcccctataccgcttaaccattccaccgatctaattttcttacctgaggag
aaaaaggctgtgcaaaaagaggtgcaacctccccaatctaagccagtgaaaccaaccgca
gtccgggcgtcagtattatcactcaacaccagtgttaactctgtcctgaactacagtagt
gctagcgccgcctctacaccagccggtaaaggtaagacgatagccgcatcgagcaccccg
aacaaacctaccgttacaccagcagcgcgagaaccttcaccggttatgacaaatatgaca
acgatcggtaattttgctgccgtggctgctaataaccttaacaaaacagtaaacaccagt
acagaggcgccaccagcgccgacacagcaacaacagactgcaccttgtcctgccccaacg
gccccgaaaccttccaacgacgtagcacccaccaccgagaacattttaaaccaaacaacg
cacctgctaaattcggtcactgcgccgcctcaacaagtaccaacggtacctgaaaacgtt
caaacgatacctaatggaagtgtcgatgaaaagatctcagagggcatgtcgaccctaaaa
accatggcccagcaagtgatagatagggcgggactggactcgcaaccgcaacatcaaccc
caagtgatcctcgaaccgcctcggagtcagaaccaggcgaaaacggaggcgcatattccg
cctctgcttggtgtcgcacctttaggggctgtaccgctacagaaagaacaccagctgcaa
ttccaattgatggaagcggcttacttccacatgccccatccatcagatacggagagaata
cggacgtatctggcaaggaacccgtgcaatacaccttcttattatatacaaactccgcta
tttaactcagacacgccagagttttatcaaagacttggtacagaaacgctctttttcgtg
ttttactacatggaaggcacaaaggctcagtatttagccgcgaaggctcttaagaaacag
agctggaggtttcacacaaaatatatgatgtggtttcagaggcacgaagaaccgaaaatt
attaacgaggagtacgaacagggtacctacatatattttgattacgaaaaatggggtcaa
aggaaaaaagaaggcttcacatttgaatataagtatctagaagataaagaccttaattaa
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