Anthonomus grandis grandis (boll weevil): 126740469
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Entry
126740469 CDS
T08911
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126740469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126740469
03012 Translation factors [BR:
agrg03012
]
126740469
Enzymes [BR:
agrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126740469
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126740469
Translation factors [BR:
agrg03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126740469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
AAA_22
AAA_19
AAA_14
ATPase
PhoH
ResIII
NPHP3_N
Cas3-like_C_2
RsgA_GTPase
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126740469
NCBI-ProteinID:
XP_050302457
LinkDB
All DBs
Position
9:16599200..16614642
Genome browser
AA seq
1040 aa
AA seq
DB search
MGRRGKKAWRYHKKLSNVEEGTSSNSFGSWRNESQNEVSYRSDSERPPPGTKGRDIGLWY
RSRQKKRSLEESESQSSQMSPESSWSERSQVLYEEDSFKAHQHGKDIGLMYRSRQMKDKR
HDLEAGTTQATAIYENREQSRKKLNLEKMKVQAEKPLGSIVLSESKKANINQLLNQTERS
IYPRSFLEKTNSFEHLEETDFKHEFLQHITGNIIEKLKAAPSTGKQFKNEFTDIMLLDEL
KKKKAEEGYQRMQKVRKNLPSMDKKDEILDMIQKNQITVISGETGCGKTTQVAQFILDHY
ISTSRGSECKIICTQPRRISAISVAERVAQERDEQLGISVGYQIRLEKVAPRERGSILFC
TTGVLLKYMESNPSLKDVSHLILDEIHERDVTCDFLITLLKDVIRYRTDIKVILMSATLN
AEAFSKYFNGAPHINIPGFTWPVQQYFLEDVLQLTDFKFVDDSRPIWVRKMNSKKDRAWS
DSVAPFIRQLEAEGKYKQSVIAELWKPNSEKQNNFLIYTLILKICQEKYDGAILVFVPGF
ADIQFLVKKMQESGNFPASKYLIFPLHSQLPTMDQKQIFQTPPKGMRKIIISTNIAETSI
TIDDVTCVIDSGYIKISNLDLESGIETLQPELVSQANAAQRKGRAGRVKPGTCYHLITKY
RYDMLDKFLKPEVLRKRLESVILTLKMLQLGEAEPFLSRLMDPPQSKSIQSSLALLQRMG
ALTDEEGLTPLGFHMAKLPVGPHCSKMLIMASLFSCVDPVLSVAASLGFKDAFQLSTSES
KEADKMKYQLSGDSYSDHITMHYAISGYEEADNKWAFCRKYYLSSSILKLLIDMKQQFAR
ELFDMHFIKDPHPKSHSSNLNSNNMALVKAIIAAGLYPNVAIITKQKAGKRPSMLRSIDY
EKMQFHPKSVMNYVEVIPSPLLVYFLRLKSIKLYVHEATIVFPLSIVFFGDKYKIHSDEQ
SKFKGISINDNMRFICTESTAMLIQRLREHLNEILEWKVSHPGFVDWSSSTPETQVLRVI
MDLIRTEDSGDFDLSDFEDD
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaagaggtaagaaagcctggagatatcacaagaaattatcgaatgttgaagaa
ggtacaagttcaaacagctttggatcatggagaaatgaaagccaaaatgaagtatcatat
agaagtgactcagaacgaccaccccctgggacaaaaggaagggatattgggttatggtat
agatcaaggcagaaaaagagaagtttggaagaaagtgaatctcaaagctctcaaatgagc
ccagagtcatcatggtccgaaaggtcacaagttctatatgaagaagattcttttaaggcc
catcaacatggaaaagatataggattaatgtataggtcaaggcaaatgaaggataaaaga
catgatttagaagcaggtacaacccaagcaacagcaatatatgaaaatagggaacaatca
agaaagaagttgaatttggaaaagatgaaagttcaggcagaaaaaccacttggatctata
gtattatctgaaagcaaaaaagcaaacataaatcagttgttaaaccaaactgaaagatcc
atatatcctaggtcgtttttagaaaaaaccaactcttttgaacatttagaagaaactgat
tttaaacatgagtttttgcaacatattacaggaaatatcatagaaaaattgaaagctgca
cccagtacagggaagcaatttaaaaatgaatttacggatattatgttattagacgaactt
aaaaagaaaaaggcagaagaaggttatcaacgcatgcaaaaagtgagaaaaaatttgcct
tctatggacaaaaaagatgaaattttggacatgattcaaaaaaatcagattactgtaatt
agtggagaaactggttgtggaaaaactactcaggtagcacagtttatcctggatcactac
atatctacatctaggggctcagaatgtaaaataatatgtacccaacccagaaggatcagt
gctatttctgttgcggaaagggttgcccaggagagagatgaacagttgggtataagtgtt
gggtaccagatcagattagaaaaggttgctccaagagaaagaggctctatcctattttgt
accaccggagtactcttaaaatacatggaatcaaatccatccctaaaagatgtatctcat
ttaatcctagacgaaatccacgaacgtgacgtcacttgtgattttcttattactctatta
aaagacgttattagatacaggactgacatcaaggttattcttatgagcgctacgttaaat
gccgaagcattttcgaaatattttaatggcgcaccgcacattaatattccgggttttact
tggccagtacagcaatactttttggaagatgttttgcagttgacggactttaaatttgtg
gacgacagtaggcctatttgggttcgaaagatgaatagcaaaaaagaccgggcatggtcg
gattctgtggccccatttataagacaattagaagccgagggaaagtataaacagtcagtt
attgcagaattatggaaacccaatagtgaaaaacaaaacaactttttaatatacacatta
attttaaaaatatgccaagaaaaatacgacggggccatattagtttttgtaccaggattc
gcggatattcaattcctagttaaaaaaatgcaggaatctggtaattttcctgcaagcaaa
tacttaatatttccgttgcattcccaattgcctactatggatcaaaaacaaatattccaa
actcctccaaaaggcatgagaaaaattataatttcaactaatatagctgaaacttccatc
acaattgatgatgtgacttgtgttatagacagtggatatattaaaatttcaaatcttgat
ttagaatctggcattgaaactttacaaccggaattggtatctcaagcaaacgccgcacaa
agaaaaggacgcgcgggtcgtgtgaaaccaggtacttgctatcatttgattacaaaatat
cgatacgatatgttggacaaatttctgaagcccgaagtgcttcggaaacgactggaaagt
gtgattttgacactgaaaatgttacagttaggcgaagcagaaccgtttctatcaagacta
atggatccacctcaaagcaaatcgatccagtcatcattagcccttttacaaagaatgggt
gcacttacagatgaagaaggactgacgccccttgggttccatatggctaagttgccggtg
gggccacactgttccaaaatgcttattatggcttcgctgtttagttgcgtcgatcctgtt
ttgtccgttgctgcatctttaggttttaaagatgcctttcaactgagcacgtcagaatca
aaagaagccgataaaatgaaataccagctctctggcgactcttacagtgatcacattaca
atgcattatgctatatctggttatgaagaagcagataacaaatgggccttctgtaggaaa
tattaccttagttcaagtattctaaaactgcttatagatatgaaacagcaattcgctagg
gagttatttgatatgcactttattaaagatcctcacccaaagagccattcgagtaactta
aatagtaataatatggcgcttgttaaggctattattgcagcggggctatatccaaatgtt
gctattattaccaaacaaaaagccggcaagagaccttcaatgctgcgatctatcgactat
gaaaagatgcaatttcatccgaaatctgttatgaattatgtagaagtaattccttcgcct
ttactagtttactttttgagattaaaatctattaaactgtatgttcatgaagctaccatc
gttttcccactttctattgtattttttggagataaatacaagattcacagcgatgaacaa
agcaaattcaaaggtatctcaattaacgataatatgagatttatttgtactgagagtact
gctatgttaattcaaaggcttagggaacatttaaatgagatattagaatggaaagtgtct
catccgggatttgtcgattggtccagttcaacacctgaaactcaagttttgcgagtaata
atggacttgattcgaaccgaggacagtggagattttgatttaagcgattttgaagatgat
taa
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