Anthonomus grandis grandis (boll weevil): 126742288
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Entry
126742288 CDS
T08911
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126742288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126742288
Enzymes [BR:
agrg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
126742288
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126742288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
126742288
NCBI-ProteinID:
XP_050304873
LinkDB
All DBs
Position
11:16304110..16353915
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AA seq
536 aa
AA seq
DB search
MCEVNNRNFQHLYPEIKRALQDAKFVSVDLEFSALYPLKDFSPSIIDTPSERYRKLKKNL
EIIIPLQVGLTAFGFDSDRNSYCGKVYTFFVQPACFQGIHKNFCFQSSTLNFLKLYNFDF
NKFVYDGIPFMNKDQEEELRQMMSSNSLTEIDLNCPLEYYTILERHSGIIKSWYEKAKVG
DFLALPEICTNRQVDEEIIYFVHKEFRRRFENLWTYVENNEFTVKKVTKKELSILNNSNS
LNEQTINNLLGFSKVFRLLTSLKKPIVGHNVYQDVLLMIGSFETNLPNSYSSFKKLANEL
FPIVFDTRHISYSIRDTVPREKSWNDRGLDTIFDYFKNGIGRTLASNAPAIEIEEKEDSV
GKFHHAGWDSFCAGYIFIRLAHLNIYQKYPISKQFVSSEHIAALSHLKNKVNIIRGSVSH
INLDGEDPSSTRPPYLVIESLKNKPVCIPQVASLLSTFGYTEVRKIPYQKKIALVAVDNY
GNARRILRDFKNMSTEYDVQRYNALKHSPFARFFFVGGLTVSSVLILWITHAVIKR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagtaaataatcgtaattttcaacacctgtatccagaaatcaaaagagccctg
caggatgctaagtttgttagtgttgacttagagttcagcgctttgtatccccttaaagac
ttcagcccgagtataatcgataccccttcagaaagatatagaaaactaaagaagaaccta
gaaattataataccactacaagtaggtcttacagcttttggttttgactcggaccgcaat
agttattgtggaaaagtgtacactttctttgttcagcccgcctgcttccaaggaattcat
aaaaacttttgtttccaatctagcacattaaatttcttaaagttgtacaatttcgatttt
aataagtttgtttatgatggaattccatttatgaacaaagatcaggaagaagaactaaga
caaatgatgtctagtaatagccttactgaaattgaccttaactgtcctttagaatactat
acaatcctcgagcgacatagtggaataattaaaagttggtatgagaaggctaaagtgggt
gattttttagccttaccagaaatctgcactaatagacaagtcgatgaagaaattatctat
tttgtgcataaagaattcagaagaagatttgaaaatctctggacctatgtagaaaataat
gaatttactgtaaaaaaagtaactaaaaaagagcttagtattttaaataatagtaattcc
ttgaatgagcaaacgataaataatttgctgggctttagtaaagtatttaggctgttaacc
tcattgaaaaaaccaattgtaggacataatgtgtatcaggatgtactgttgatgatcggg
agctttgaaaccaacctgcctaactcttatagtagttttaaaaaactggctaatgaactc
tttcctattgtgtttgataccagacatatctcttatagtatcagagatacggttcctagg
gaaaagtcctggaatgaccgaggtttggatacaattttcgactattttaaaaacggaatc
ggtcgaacgctggcctcgaacgcgcctgcaatagagattgaagaaaaagaagatagtgtt
ggtaaatttcaccatgcgggctgggactccttctgtgccggctatattttcattaggtta
gcccatctgaatatttaccaaaaatatccgatttcaaaacagttcgtcagcagcgagcat
atagcggccttatcacatctgaaaaataaggttaacattattagagggtctgtatctcac
attaatctagatggagaggatccaagttccacgaggcctccatacttagtgattgagtcg
ctcaaaaataaaccagtttgcatacctcaggtggcatccctgctaagtacttttggttac
accgaagttagaaaaattccttaccaaaagaagatcgctttggtagcagtagataactat
ggcaatgccagacgaattttaagagacttcaagaatatgagcaccgaatatgatgtgcaa
agatacaatgcgctaaaacactcaccctttgccagatttttctttgtgggtggcctaact
gtctccagtgttctcattctatggattacccatgcagtgataaaaagatag
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