Anthonomus grandis grandis (boll weevil): 126742939
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Entry
126742939 CDS
T08911
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03022
Basal transcription factors
agrg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126742939
09124 Replication and repair
03420 Nucleotide excision repair
126742939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrg03021
]
126742939
03400 DNA repair and recombination proteins [BR:
agrg03400
]
126742939
Transcription machinery [BR:
agrg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126742939
DNA repair and recombination proteins [BR:
agrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126742939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
DUF5887
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
126742939
NCBI-ProteinID:
XP_050305782
LinkDB
All DBs
Position
12:complement(26836227..26853740)
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AA seq
299 aa
AA seq
DB search
MNNIELPTDNNQEVSVDESSTVIIILDTNPAQNYLRDKPNQLTNVVDSLIAFGNCHLMQK
AQNKLAIMACHSKSSQFLYPGPRKPLDVRQIDGQYEVFLQVEKTVKQNLALLLTTEPTIF
SSESLLAGAIAMALCYIARQERNKPTGVKTNSRILVITGSGDSASQYMNYMNVFFTAQKQ
NVVIDVCAFDHNLSLLRQACDVTGGLYLKVPQISALLQFLLWVFLPEPSMREKLVLPPPV
KVDYRAACFCHRELIDIGYVCSVCLSVFCKFSPICTTCHTVFKIPGQLSMKPKKKKMKL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatcgaactacctacagataataatcaagaagtatcagttgatgagtcgagc
acagtgataataattttggatactaatcctgctcaaaattatttgagagataaacctaat
cagctaacaaatgttgtagactctcttatagcctttggaaattgtcacctaatgcaaaaa
gctcaaaataagttggctataatggcatgccactccaaatcaagtcagtttctttacccg
ggaccaagaaaacctttggatgtgcgacaaatagacggtcaatatgaagtatttttacaa
gtagagaaaactgtcaaacaaaacttagctttattgttaactactgaaccgaccattttt
tcttcggaatctttgctagcaggtgccatagcaatggcgttgtgctatattgcaaggcaa
gaaagaaataaaccaaccggtgtcaaaaccaattcacgtatactagtcataacaggaagt
ggagattcagcgtcacagtatatgaactacatgaacgtatttttcactgcgcaaaaacaa
aacgttgtaatagatgtttgtgcatttgatcacaatttaagcctgttgagacaagcatgt
gatgttacaggcgggctctatttgaaggtacctcaaatttcagctttattacagtttctg
ttgtgggtatttttacctgaaccctcaatgcgggaaaaattagttttacctccacctgtc
aaagttgattatagggcagcgtgtttttgtcatcgggagttaattgatattggatatgtt
tgttctgtctgtctatctgttttctgcaagtttagtcccatttgtacaacttgccacact
gtttttaagatacctggacaactatcaatgaagccgaagaagaagaaaatgaaactttaa
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