Anthonomus grandis grandis (boll weevil): 126743044
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Entry
126743044 CDS
T08911
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126743044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126743044
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126743044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
126743044
NCBI-ProteinID:
XP_050305926
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All DBs
Position
12:26432231..26518991
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AA seq
667 aa
AA seq
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MAFSFGNTSVPAFGSTAQKPTGFAAPFGSVQPTTTQSTNFGFGQSQSAATFGSTFGAAPT
SAPPAFGSTQGFGAQPAASTSVFGSAFGTPASSAAPAFGTTFGTTQTQGATGIFGQATSK
PSTLFGTPATSTTGLFGAAQTTTPGLFGTSQTVASTPSLFGPSSTTPSLFGQPAATATTP
SLFGTSFGQPAVSAAPAPSFGGGLFGAVPQSSAPSLFGSSSFGTTTTSSFGGFGAATTST
GGFGGFGTGTTTGTGLFGQKPAQPTVSGVQAAQQTTTLNKNQQIIASVYAINIFNDERDD
ILKKWNMLQACWGTGKGFYNSQLPPVEYTPQNPFYRFKAMGYNVIPEQDNSEGIVKLVFN
RKVTELRNQQDILKNGLAGILGNRPNLTVDIVLLKATTDSQTEVKMCVSEKGVTGINRKI
PATELAAFLNQPMQKQQLTNVGVLSVTPFVTPSKAELEEYLKNPPPGIEPQMWQAAIQDN
PNPKKYIPVSINGFSDLRARMLNQEYQTGLHSAFLEKVDKDIKELKTKHASSLAHIADLK
QKFLELQHRVLRVLVKQESTRKVGVAIQPEEEVLRGRLELMYTQLNQPKQFKGQINELLS
HVKLLETSAKQSGCYRIDADAQEDIRQFLKMEQSGISQLVNIVNNDIKALQIISDGYKEL
LEKKQFR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcatttagctttggaaatacctctgttcctgcttttggtagtactgcccagaaacct
acgggtttcgccgcacctttcggctcagtacagccgaccactacacaatccaccaacttt
ggttttggtcaatcccagtcagcagcaacatttggttctacctttggggcggcacccacc
agtgctccacccgctttcggatccacacagggatttggtgcacaaccagcggcttccact
tctgtttttgggtccgcatttggcacgcctgctagcagtgcagctccggcttttgggacc
acctttggaacaacacaaactcaaggagccacaggaatttttggacaagctacaagtaaa
ccaagcacactttttggtacccctgccacttcaaccacaggtctatttggagcggcacaa
acaacaactccaggtctttttggaactagtcaaactgtagctagtactccttccctcttt
ggcccatcctcaacaacaccttctctttttggtcaaccagctgcaactgctacgacacct
agtttgttcggcacctcatttggacaaccagcagttagtgcagccccagctccgtctttt
gggggtggattatttggtgctgtgccgcaaagttccgccccatccttatttggatcgtct
agcttcggtactactacgactagttcgtttggtggctttggtgcagcgaccactagtact
ggtggatttggcggatttggaacaggaactactaccgggacaggtctgtttggacaaaaa
cctgcacaacctactgtctctggtgttcaagcagctcaacagactaccaccctaaataaa
aaccaacaaatcatcgcctctgtttatgcaataaatatttttaatgacgaaagagacgat
atcttaaaaaaatggaatatgttacaagcttgttggggaacaggaaagggtttttacaat
tctcagttgccgcctgtggagtatacacctcaaaatccattttaccggttcaaagcaatg
ggatacaatgttatacctgaacaagataactcagaaggaatagtcaaattggtttttaat
cgaaaggtaacggaattaagaaatcaacaagacatcttaaaaaacggattagcaggaatc
cttggaaatcgacctaatcttaccgttgacatagtattattaaaagcaacaacagatagt
cagactgaagtaaaaatgtgtgtgtcagaaaaaggcgtcacaggtattaacagaaaaata
cctgccaccgaactggcagcttttttaaaccaacccatgcagaaacagcaacttactaat
gtaggagttttatctgtcaccccattcgtaacgcctagtaaagcggagttggaagaatat
ttaaaaaatcccccaccaggtatagaaccacagatgtggcaggctgcaattcaggacaat
ccaaatcccaaaaagtacatcccagtgtccattaacggattctcagacctgcgagcacga
atgttaaatcaggaatatcagaccggtttgcattcagcctttttagaaaaggtcgacaag
gatattaaggaattaaagaccaagcatgcttcatctctggctcatattgctgatctcaag
caaaaatttttagaactacagcatagagtattgagggtgttggtgaaacaagaaagcaca
aggaaagtaggagtggctattcaacctgaggaagaggtgcttaggggacgcttagaatta
atgtacacccagcttaatcaacccaaacaatttaagggtcaaatcaatgaactactctct
catgttaaattgttagagacttcagccaaacaaagcggctgttacagaattgacgccgac
gcccaagaagacattcgacaattcctcaagatggaacagagtggtatctctcaactcgtc
aacatcgttaataatgacataaaagctttacaaatcatcagcgatggctacaaggaatta
ttggaaaaaaagcaattccgataa
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