Anthonomus grandis grandis (boll weevil): 126743268
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Entry
126743268 CDS
T08911
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K11644
paired amphipathic helix protein Sin3a
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126743268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
agrg03036
]
126743268
Chromosome and associated proteins [BR:
agrg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
126743268
REST complex
126743268
Heterochromatin formation proteins
Other heterochromatin formation proteins
126743268
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Tricorn_C1
GBP_C
Motif
Other DBs
NCBI-GeneID:
126743268
NCBI-ProteinID:
XP_050306229
LinkDB
All DBs
Position
12:complement(10766541..10843227)
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AA seq
1382 aa
AA seq
DB search
MKRLRVDEPSKEGSGPPSIAPSSLFRSSLPNAAPGLAYPSGTTTVKVLNEGMQSGLYSQA
PPVSYGTMPVAAAPHSGGKPQSMPIAVAGHNAMRTSGASPPNASLQEPPPQQSGNFQRLK
VEDALSYLDLVKFKFGSKPQVYNDFLDIMKEFKSQSIDTPGVIERVSNLFKGFPDLIVGF
NTFLPPGYKIEVRSDQGGYAFSVSVSMPSPTGTISSDQQKSAMILSGSGRIMPAPPSQPV
GQPPPPRPISVQTQPPQQQSQPQPQQQQQQPPPQPPPQQQQQQQQSHQHIPSVLPQPPLA
PPSVTHHPPSGYGMSAPTNYGLSLSAAQAAVTHALQGHTDTPQNQPVEFNHAINYVNKIK
NRFQGQPEKYKRFLEILHTYQKEQRTMKESNVGANVKHLTEQEVYSQVAKLFENQSDLLA
EFGQFLPDATSHINQAPVLEHSNSVNKKSLKPYHRDRDHLPDRHISHKSSHQSGSAKRSS
SPYSSYHHRDAPPPKKHKVSPAFRDVSLSEAGKYGTLNDYAFFDKVRKALRSQEIYNNFL
RCLILFNQEIISKSELLQVVTAFLGKFPELLKWFREFMSQNETVPIPFSVARPERPQGDH
KLEIDFSTAKRLGASYCTIPKAQEGLKCSGRTQLCKEVLNDQWVSFPTWSSEDSTFVSSR
KTQYEEYMYRCEDERFELDVVIETNASTIRLLESVSKKMGRMSADDLAKYRLDDTSGISL
TTLHQKALKRVYGEKALDIIEGLKKNPAVAVSVILKRLKAKEDEWREAQKGFNKIWREQN
EKYYLKSLDHQGINFKQTDLKAIRTKNLFNEIETIFDERHDQNEEGPEPYSGPHLAIPYR
DKGILDDAANLLIHHVKRQTGIQKGEKRKIKQLLRQFLPDLFFHTRQPLSDDEREDEDEN
DDKVSPNSSPNRDGKESKSKEEAGRSSARSTTPEMKRDPEIKEEDIKMPPYAQTNNPEEA
YTLFMANNNWYIFLRLHAILCERLLRIYERAVQIANEERQNGENRKNSTAIALRLKPKPQ
IEFEDYYPAFLDMVKTLLDGNMDANTYEDTLREMFGIHAYIAFTLDKVVSYAVRQLQHCV
TERTAIGCTELYLKEHKRGAAGGACVSAHKRVHMEQAYQRAAEKVVQEENCFKIYIYKCD
CKITIELLDTEPEDSKKVEEANKWNSYKESYTDIGHSENIKPKSPVYLRRNVRSYKQRMV
NKRSRTVSEQDDSQNKKLQTPREDGPSNSRLDHEAERQIDMFEALERKLNERAPERNETI
HPGFQVNDDQECCINETKINFAYTKDYYLYKTCAFYRARQSHPKVTKFKASKFRGWLKKW
AGSHVTDSQSKQCTDWLMGRCADVVPNRTRVLADNDLQRTPYVPYNRYRVDRLTVSSVEG
AS
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttacgagtggatgaaccctccaaggaaggaagtggacccccatccattgcc
ccaagttcccttttccggtcgtctttaccgaatgccgccccaggtctggcatatccgagt
gggacgaccactgtgaaagtgttaaacgaaggtatgcaatccggactgtactcgcaggcg
cccccggttagttacggtacgatgcccgtagcagcagcgccccattcaggtggcaagccc
caatcgatgcccatcgccgttgccggacacaacgcgatgcgtacttcgggagcttcgcca
ccgaacgcgagccttcaggaaccccctccccaacaatccggtaattttcagaggttaaag
gtggaggacgcgttaagctacctcgacctagtaaaatttaagtttggcagcaagcctcaa
gtgtacaatgactttttggacattatgaaagagtttaagagccagagcatcgacactccc
ggcgttatagagcgcgtctcgaacctgtttaagggttttcccgatttaattgtaggtttt
aatacgttcttgcctccgggatataagatcgaagtgagaagcgatcagggcggctacgcc
ttctcggtatcggtgagtatgccgagcccgacgggcaccatttcgtccgatcagcaaaaa
tccgcgatgattttgagcggtagcggtcgaattatgccggctcctcccagccaaccggta
ggtcaaccgccaccccctcggccgatatcggtgcagacgcagccgccccaacagcagtcg
caaccacaaccgcagcagcaacaacagcagccaccgccacaaccaccaccgcaacagcaa
cagcagcaacaacagtcgcaccaacatattccttctgtgctgccacagccgcctttggcg
cctccctctgtgacacatcacccgccatctgggtatggcatgtctgcgcccactaattat
ggactatcactttcggctgcgcaggctgcagtcacccacgcccttcaggggcatacggat
actcctcagaatcagcctgttgagttcaatcatgctatcaactatgtcaataagattaag
aaccgtttccaaggccaacccgaaaaatacaaacgattcctcgaaatactgcacacgtac
caaaaggagcaacgcacaatgaaggaatcgaacgtcggggccaacgtaaaacatctcact
gaacaagaagtctacagccaggtggccaaattgtttgaaaaccaaagcgacctgctcgcc
gagttcggtcaatttctaccagatgccaccagccatatcaatcaggcgccggtgttggaa
cattcgaattcggtgaataaaaagtcattgaagccgtaccatagggacagagaccatttg
cccgaccggcatatctctcacaaatccagccatcaatcgggatcggccaagaggtcttcg
tctccttactccagttaccatcacagggacgcgccaccgcccaaaaagcataaagtctcg
cctgcttttagggatgtgagtcttagtgaggctgggaaatatggtactttgaatgattat
gctttctttgataaggtccgcaaagcactacgctcccaagaaatctacaataacttcctt
cgctgccttatcctcttcaatcaggaaataatttccaaaagtgaactgttacaagtcgtc
actgcgttcctcggcaaatttcccgagttactcaaatggttccgcgaattcatgagccaa
aatgagacggtaccgattccattcagcgttgctagaccggaacgtcctcaaggcgatcat
aaactcgaaatagacttttctaccgcaaaaaggctcggcgctagctattgtaccatcccg
aaagcgcaagaggggttaaaatgctccggaaggacgcaactttgcaaggaggtgctgaac
gaccaatgggtgtccttccccacctggtcatcggaagatagtactttcgttagctcgcgt
aaaactcaatatgaggaatatatgtatcgttgcgaggacgagcggttcgagttggacgtt
gttatagagactaacgcgtctaccattcggcttttagagtcggttagtaagaaaatggga
cggatgagtgcggacgacttggcaaagtataggctggacgacacgtccgggatcagtttg
accacattacaccagaaggcgttaaagagggtttacggggaaaaggccctcgatattatt
gaagggctgaaaaagaatcccgctgttgctgtttctgtgattttgaagaggttgaaggct
aaggaggacgagtggcgagaggcacagaaaggttttaacaaaatatggcgggaacaaaac
gaaaaatactacctgaagagcctggaccatcagggcataaactttaaacagaccgacctg
aaagccataaggacaaagaatctgttcaacgaaatcgagaccatctttgatgagagacac
gatcagaacgaagagggtcccgaaccgtattccggaccccatttagccattccttatagg
gacaagggcatcttggacgacgcggcgaacctcctgattcaccacgtaaaacgccagacg
ggaatccaaaagggggaaaagcggaaaataaaacagctgctccggcaatttttgccggac
ttgttttttcacacgcggcagccgcttagcgacgacgaacgggaggatgaagatgaaaac
gatgataaggtaagcccgaacagttcgccgaacagagacggtaaagaatcgaaatcgaag
gaagaagccggacgtagctcggcacggtccacgaccccggagatgaaacgcgatccggaa
atcaaagaagaagatatcaagatgcctccctacgctcaaacgaataatccggaggaggcc
tacaccctcttcatggccaacaataactggtacattttcctccgcctgcacgccattctc
tgcgaacgtttgttacgcatctacgagcgagcggtccaaatagcgaacgaagaaagacaa
aacggcgagaaccgcaaaaacagcacggcgatcgcccttcgactgaaacccaaaccgcaa
atcgagttcgaggattattatccggcatttttggacatggtaaaaacccttcttgacgga
aacatggatgccaacacgtacgaggatacattgcgagaaatgttcggaattcacgcttat
atcgcgtttacgttggataaagtggtttcttatgccgtcaggcagttacagcattgtgta
actgagaggacggcaataggatgcacggaattgtacttaaaagagcacaaaaggggagcg
gcgggcggcgcatgcgtcagcgcccataaaagggtgcatatggagcaggcgtaccaaagg
gcggccgaaaaagtcgtacaagaagaaaactgcttcaagatttatatttataaatgtgat
tgtaaaattaccattgaactgttggataccgagcctgaagattctaagaaggtcgaggag
gctaataaatggaacagttacaaagagtcttacacagatatcggtcattcagaaaacatc
aagcctaaatctcccgtctatctaaggaggaacgttcggtcatacaaacaacgaatggtc
aacaagcggtccaggaccgtaagcgaacaagatgatagccaaaataaaaagttacagacc
ccaagagaagacggtccctcgaactcgaggctggatcacgaagccgaaagacaaatcgac
atgtttgaggctctagagaggaaattaaacgaacgcgctccggaaagaaacgagacgatc
catccgggcttccaggtcaacgacgaccaagagtgctgcatcaacgaaaccaaaattaac
ttcgcgtacacgaaggattactacttgtacaaaacttgtgccttttatcgagctagacag
tcgcacccgaaggtaaccaaattcaaggcgtccaagttccgcggctggttgaagaagtgg
gcgggctcgcacgtgacggactcgcaatcgaaacagtgcaccgattggctgatgggtcgg
tgcgcggacgtcgtgcccaatcggacgcgagtgctcgccgacaacgacctccaacggaca
ccttacgtaccgtataacaggtaccgcgtcgatagacttaccgtaagcagtgtagagggc
gcgtcgtag
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integrated database retrieval system
