Anthonomus grandis grandis (boll weevil): 126743766
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Entry
126743766 CDS
T08911
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
agrg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126743766
09123 Folding, sorting and degradation
03018 RNA degradation
126743766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126743766
03041 Spliceosome [BR:
agrg03041
]
126743766
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126743766
mRNA degradation factors
5'-3' decay
Lsm complex
126743766
Spliceosome [BR:
agrg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126743766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
126743766
NCBI-ProteinID:
XP_050306941
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All DBs
Position
13:18787344..18788176
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AA seq
134 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEETHTKNKQARDQKGGRGGQHQRNRPAARGNFGNRQNKPG
GPQKLFQKNKAKPT
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctctttcattgctcagaacagcacaaaatcatcctatgttggtggaactaaaa
aatggtgaaacctacaatggtcacttagtaagctgtgacaactggatgaacattaacctc
agagaagtaatttgcacttcccgggatggtgacaagttttggagaatgcccgagtgctat
atcaggggcagcaccataaagtacctaagaatacctgacgaggttattgatatggtgaag
gaggaaactcacacaaagaacaaacaggctcgggatcagaaaggtggacgaggaggacaa
catcaaagaaacagacctgcggcaagaggtaactttggaaacaggcaaaataaacctggt
ggcccacaaaagttgtttcagaaaaacaaagcaaagcctacataa
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