Anthonomus grandis grandis (boll weevil): 126743784
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Entry
126743784 CDS
T08911
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126743784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrg03021
]
126743784
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126743784
Transcription machinery [BR:
agrg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126743784
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126743784
U7-dependent histone pre-mRNA processing factors
126743784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
126743784
NCBI-ProteinID:
XP_050306961
LinkDB
All DBs
Position
13:complement(5182710..5215361)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSDEESVVEYLNGALVSHEVSDKVQNLAKVKELLIHKAPHLLAKYLPNVLGFITEKHQDV
KRNLVGFIEEICKVRENLIPKVMVSLHMLLCDESVQVQKRVIQAAITIYRRTLAWICKAQ
TITEEMEEGWKQLHTIKLEIANMIDSDNDGIRTSSVKFLECVVLLQTYPDETENKRPNDF
SLDNVPLTLKIARRRKLEEEASNLFELLVKFHGSPHISSANLLACIGVLTNIAKNRAEFM
GRVIDALEKLYNNLPPTLTTTQVSSVKKKLKTELSNLVKHPGAYEHLGRLSPLLLELGCT
ESEIKKMVPKSDERRRYQKRTLAESSERASKRSRMERLEEAPAPSASSVVIEEEEPSLPP
AKTPHEANERFIKANLTIEKAIYLIFTSIPKLPLNMPVSFNKDYAKYMLSGRIGLEHLAD
VMAQQFVEAKVGPGVDIVVEERVEVTKRKRELEESMKEEELKPAKKDKPKPPKTKSLKLQ
EITRPLSRETKEQLLVSAVKRLISCDKIRNKNLQQKIVTTFASNFNAAVRETVLTHLLAD
LRSHVDTALAWLFEEYSITQGFARIPPLRKGIRPEECYNILLCSFIQSSSHDAIILSRLL
LEAPMITDEALEEVKIICRDDRRSGWALGLLRDLTLRKPPKQLTFLNALLNYTTYESNVV
KEAAIGHVLDLHKQYELRLIIEEFAKMNLEFLKLSKPPESLCGENQGRIKSEYWGDDFIK
ACLLPYISLLPVNPSLIHDLAKVYIQTSAEIKRIILRLIENPIRQMGMDCPDLIKLVEEC
EKGSETLVTRVIHILTDKGAPSAELVDKVKALYNTKVSDVRFLIPVLNGLSKQEITAALP
KLIKLNPVVVREVFNRLLGLHGDSPISPTELLVALHIVDTSQADLKTIIKAITLCMQEKQ
VYTQEVLAVVLQQLMEQTPLPTLLMRTVIQALGSYPRLSGFVMNILQRLILKQVWKHKVV
WEGFIKCCQRTKPQSFAVLMQLPAPQLKEVLATCKELKQPLQEHLNTFTEAQRMHVPASV
QEIILGNPVQAAKAVPVPEPAAVANASSTGSATGSGSEPNLTIAEDSPMNAPPPNVMVVP
TEPLPPGME
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaggaatcagttgtcgaatatctaaatggtgcccttgtaagccatgaggtc
agcgataaagtgcagaatctagcaaaagtcaaggagcttcttatacataaggcccctcac
cttttagccaaatacttgccgaatgtgcttggctttattaccgagaaacatcaggatgtt
aaaaggaacttggtgggatttattgaggaaatttgtaaggtgcgtgagaacctaatcccc
aaagtaatggtaagcctccacatgttactttgtgatgaatcggtccaagtacaaaaaaga
gtaatccaagcagcgatcaccatataccgcagaactttagcatggatttgtaaagctcaa
acaatcacagaggaaatggaagagggatggaagcaactgcacaccattaagctagaaatt
gctaatatgattgatagtgataatgatggtatcagaacaagttcggtaaagtttttggaa
tgtgttgtgctactacaaacttaccctgatgagactgagaacaaaagacctaatgatttc
tctctggataatgttcctttgacattaaagattgctagaagaaggaaacttgaagaggaa
gcaagtaatctctttgaactgttggtaaaatttcacggttcaccacacataagtagtgcc
aatttgttggcttgcataggagtccttacaaacattgctaaaaacagagccgagtttatg
gggagggttatagatgctcttgagaaactttataataatttacctcccaccctaaccacc
acccaagtcagttctgttaagaagaaactgaaaactgaattgtccaatttggttaagcat
cccggagcttatgaacatctgggcaggttgagtcctcttttattggaattaggttgtacc
gagagcgaaataaagaaaatggtgccgaaatcggacgagcgacgtagataccaaaagcgc
accctggcggaatcctcggaacgcgcctccaaacgatcccgaatggaaagattagaggag
gcacctgctccgtccgcttcctcggtcgttatcgaagaggaggaaccctctttacctccc
gcgaaaacgccacacgaagccaacgagaggttcattaaagcgaacctgacgatcgagaaa
gccatttatttgatcttcacgagtattccaaagttaccgttgaatatgccggtcagtttt
aataaggattacgcgaaatatatgttgagcggcaggatcggactggagcatttggccgac
gtgatggcgcagcagttcgtcgaggccaaagttggtcccggcgtagatatcgtagtggag
gagagagttgaggtgacgaaaaggaaacgggaacttgaagagagtatgaaggaggaggaa
ttgaagccggccaaaaaagataaaccaaaaccccccaaaaccaaatcgctaaaactccaa
gagatcactcgacccctttcacgagaaaccaaagaacagttactcgtatcggcagtgaaa
cgcctcatcagttgcgacaagatccgtaacaaaaatttgcaacagaaaatcgtcaccact
tttgcaagtaactttaacgcagcggtgcgggaaactgtgttaacgcacttattggccgac
ttaagaagccacgtggatacggccctggcttggctgtttgaggaatacagtataacgcaa
ggatttgccagaattcctccgttaaggaagggaataaggccggaggagtgttacaatatt
cttttgtgcagttttattcagtcgtcatcgcacgacgctataattttatccaggttgttg
ttggaggctcccatgataactgacgaagctttggaggaggtcaagatcatttgtagggac
gatcgaagatcgggttgggctttaggcctcctaagagacctgacactaagaaaacccccg
aagcaactgacattcctcaacgcccttttgaattataccacttacgaatcgaatgtggta
aaagaagccgccatcggacacgttttggacttacacaaacagtacgagctccgattgatt
atcgaggagttcgctaagatgaatttagagttccttaaactttcgaaaccaccagagagc
ttatgtggagaaaaccaaggacgtatcaaaagtgaatattggggagacgattttatcaaa
gcctgtttgttaccttacatctcgctattgccagttaatccgtctttaattcacgacttg
gctaaagtgtatatccagactagtgcagaaataaaacgtatcattttacgtttaatagaa
aaccctatacgccaaatgggaatggactgtcccgatttgattaaactggtagaagagtgt
gaaaagggttcggaaacgttggtcacaagggtgattcatattttaaccgataagggggcg
cccagtgcagaactcgttgacaaagttaaggcactttataacaccaaagtgtcggacgtt
agatttttgattcctgtgttgaatggtttgtccaaacaagagattacagcggccctacca
aaactgataaaactaaacccggtggtagtcagagaggtctttaatagacttttgggactt
catggcgacagtccgatttcgcctacagagctattagtcgcgttacacatcgtggacacc
agccaagctgacctcaagactattattaaagccatcacgctttgtatgcaagaaaaacag
gtttacacccaagaagttttagctgtggtgttacaacagttaatggagcagacacctttg
ccgacacttttaatgagaacggtaattcaagcgttgggaagctatccacgtctgtctgga
tttgttatgaatattttgcagaggcttattttaaaacaggtgtggaaacacaaagtggtc
tgggaaggtttcataaagtgctgtcaacgtaccaaaccgcaaagtttcgcggttctaatg
caactgcccgctccccagttgaaggaggtgttggccacgtgcaaggaattgaagcaaccg
ctccaagagcacctgaacacttttaccgaagcacagaggatgcacgtgcccgcctccgta
caggaaattattctgggtaatccggtgcaggctgctaaggcagttccggttccggaaccc
gctgctgtcgctaacgcatcttcgacgggttctgcgacgggttccggaagtgaaccgaat
ttgacgatcgccgaggattccccgatgaatgcccctcctccaaatgtgatggtcgtacct
acggaaccgttgcctccgggaatggagtag
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integrated database retrieval system
