Anthonomus grandis grandis (boll weevil): 126744250
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Entry
126744250 CDS
T08911
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg04382
Cornified envelope formation
agrg04512
ECM-receptor interaction
agrg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126744250
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126744250
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126744250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrg04147
]
126744250
00536 Glycosaminoglycan binding proteins [BR:
agrg00536
]
126744250
Exosome [BR:
agrg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126744250
Glycosaminoglycan binding proteins [BR:
agrg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126744250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126744250
NCBI-ProteinID:
XP_050307579
LinkDB
All DBs
Position
13:complement(9715481..9733882)
Genome browser
AA seq
1984 aa
AA seq
DB search
MTDHGLKWFMVLYLGISAVSGQFLQGSVHRSANRTGLYGRPDNRNYPRRPSGGTYRNGGY
DDVQTSQEYSSNTRVEVEDENEIDEDEQENRGDQAASQELFGETSSPRYDQSYEYGSRGY
PGGRTWEAAGGYGGRASYGTSHGGYGSGSAAAGGEYGSQSQGRYDSSYSSGTGSGYTGTG
SASGGYVGAGAGSGGYAGAGASSGGYAGAGAGSGGYSAGAVSVGRGGASQSSGYDSYGSY
PSSPYENRRPYGSSYDIIEAPGSALGPRNMSEKCIPKCFAEKGNRGFPGLPGRNGDKGIR
GFPGDEGLAGEKGDRGETGPQGPRGPKGDRGKTGLPGFPGVNGIPGLPGPEGPPGIPGLD
GCNGTDGSPGLPGAQGDSGPRGFPGPQGIKGEKGEAAHCEINLKGQKGEPGRDGVTGPPG
HPGPQGPPGLPGPAGDIGPRGFTGPPGAKGQKGQMGVGYSGMKGQKGETGPPGQKGDSPL
ARSEFHNRTTQIGPKGDQGMKGDRGDMGFQGQKGDQGVEGDYGIPGAIGMKGEKGLIGPP
GPRGRDGYAGPPGPPGQKGDRGLEGLPGLPGRPGSKGEPGRDGPKGNLGLTGPPGPPGGG
KGTPGPPGPQGPRGYPGPQGPKGTDGFNGDPGQRGPPGPVGGPGVPGRAGPEGPPGDKGD
KGESGSIGHPGGEGPRGFPGLQGPQGPRGNPGEKGYSIIGPKGDNGIPGRDGDKGSKGEK
GFQGTRGAPGDSLNGIPGDSGPPGPRGEKGNAGRPGIPGAPGSFGEKGDKGGTCIDCLPG
PKGDKGDRGFDGREGDIGPRGPPGPPGAMGQPGQVGIPGIPGKPGAPGKDGTDGPDGPPG
DRGLPAQVSESLVKGNKGDKGEQGLNGRPGPIGPMGGPGPKGDKGLAGFPGEKGDKGLKG
YDGADGVPGLDGTPGQKGQKGDSVKGEMGPPGFSGSPGEKGEPGLQGPQGKAGRCAANIV
AQMKGSQGPMGPKGEPGIPGPQGLPGLRGEPGTPGPKGNTGPMGPPGPIGRRGLTGPRGD
KGNVGPMGFPGDRGLDGARGLPGLIGPRGIKGEPGIPQAGPSGPPGVMGLKGEKGIPGFP
GKPGPHGNDGLQGLMGEKGDMGVAGLNGLVGPPGPKGEPGPIGPAGIPGSTGPPGPPGPK
GLQGLKGESGKPGLPGFPGQKGTKGDFGPAGLPGLKGAMGRPGPSGNPGLNGRPGLPGEK
GDKGYQGPPGLTGIIGMPGEKGYSGLKGDRGPEGRPGLPGPPGLPGLKGNAGIPGLHGRK
GEPGAASEKGQKGEPGISGPRGRDGLPGAPGPEGPKGDIGLPGQGLPGYPGQKGDRGTPG
FDGAPGTPGKKGDTGVPGFTGPKGDKGLPGIPGSPGMDGRDGLTGLKGDRGFPGIPGITG
EKGDKGQAGLNGYNGSPGEKGMPGPLGPEGYPGIKGDMGERGPPGIPITIKGDKGEPGPP
GIIGKDGEKGDRGLPGPAGIKGDKGDIGFPGLKGDTGWPGPEGPKGDRGPAGLAGLPGLT
IKGEKGLPGLPGKNGREGAPGPQGEKGISGIPGLVGRPGVPGPPGPIGLQGAKGDRGFDG
RPGPVGPPGPPGRPGLDGLQGPLGEKGDRGPPGLMGVPGEKGDRGIPGVPGPVGVQGEKG
DRGLDGLTGPRGPPGPQGFKGELGARGEVGAIGLIGLKGDKGDSGRPGLPGPKGNAGLEG
MKGAQGLDGRPGVDGYPGTPGAIGPKGDKGYPGPPGSPGRMGEKGDAGLDGRPGLDGVPG
IVGPKGDQGEPCVQTSDYLTGTLLVRHSQSREVPQCEAGHTKLWEGYSLLYVSGNEKPHA
QDLGMAGSCVRRFSTMPFVFCDIDNVCNYANRNDKSYWLSTSAPIPMMPVEETAIQEYIS
RCVVCETPANVIAVHSQSLSLPECPGGWSSLWIGYSFVMHTGAGANGGGQSLSSPGSCLE
DFRSSPFIECNGAQGHCHYFSNMLSFWLATIEQSQQFQKPQKQTLKAGNVRDRVSRCQVC
IKNT
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccatggactcaagtggttcatggtgttgtatttggggatatcagccgtatct
gggcaatttcttcaaggcagcgtacatagatcggcgaacagaacgggactctacggaaga
ccggacaatcgcaattatccaaggagaccttcgggaggtacatacagaaatggaggttac
gacgacgtgcaaacctcacaagaatacagcagcaatactcgagtagaggttgaggatgaa
aatgaaattgacgaagatgagcaagaaaacagaggggaccaagctgcaagccaagagctc
ttcggtgaaacttcatcgccacggtatgaccaatcgtacgaatacggatccagaggctat
cccggaggaagaacttgggaggcagcgggaggttatggcggtagagcctcctatggaaca
tctcacggcggttacggttctggatctgcagcagctggtggtgaatatggatcgcaatcc
caaggaagatatgattcaagttacagctctggaacaggctctggatataccggaacaggt
tcagcctcgggaggatatgtcggagcgggtgctggctcaggaggatatgctggagcaggt
gcaagctcaggagggtatgccggagcaggtgcaggctctggaggatattccgcaggagca
gtctccgtgggtcgaggaggagcctcccagagtagtggatatgattcatacgggtcctac
ccaagcagtccatatgaaaaccgaagaccgtacggtagcagttacgatattatcgaagct
cctggcagcgccctcggtccaagaaacatgtctgaaaaatgcattccaaagtgttttgcc
gaaaaaggaaacagaggtttcccaggcctcccaggtcgtaacggcgataaaggtatccgt
ggatttccaggagatgaaggtctagcaggcgaaaaaggagatagaggagaaactggtccg
cagggacctcgcggtcccaaaggtgatagaggaaaaacaggtcttcccggtttccctggt
gtaaacggaatccctggtctaccaggtcctgaaggacctcccggtatacctggattggat
ggttgtaatggtacagatggaagccccggtcttcctggtgctcagggtgatagcggtccc
agaggttttcccggaccacaaggtataaaaggagagaagggtgaggctgcccactgtgaa
attaacttaaagggccaaaaaggagaacctggaagagacggcgttaccggaccgcctgga
catccagggccacaaggtccacctgggttacccgggcctgctggggatattggtcctaga
ggttttacgggcccaccgggggccaaaggtcaaaaaggccaaatgggagtgggatatagt
ggaatgaaaggtcagaaaggagaaacgggcccaccaggtcaaaaaggtgactctccactc
gctagatcggagttccacaatagaactacccagatcggtcctaaaggagaccaaggtatg
aaaggtgaccgcggagatatgggttttcaaggtcaaaagggagaccaaggtgttgaagga
gactatggtattcccggagccatcggtatgaagggagagaaaggacttatcggtccacct
ggcccaagggggcgtgacggctatgctggtccaccaggtccaccaggacagaaaggagat
cgaggattagaaggacttccaggtttacccggcagaccgggatctaagggagaaccggga
cgtgacggccctaaaggaaatttaggtttaacgggaccacccgggccgccgggaggtgga
aaaggaacgccgggaccacctggacctcaaggtcctagaggatatcctggtccgcaagga
cctaaaggtactgacggttttaatggagatcctgggcaaagaggtccacctggaccagtg
ggtggaccgggagtgccaggaagagcgggtcctgaaggtccgcctggcgataagggagac
aaaggtgaatctggttcaattggccatccaggaggagaaggaccgagaggttttccaggt
ttgcagggtcctcagggtcctagaggaaaccctggtgaaaaaggttattcaataattggc
ccaaaaggtgataatggaattcccggacgagacggcgataaaggaagtaagggtgaaaaa
ggttttcaaggaactcgaggagcgcctggagattcccttaacggtatccctggagactct
ggtccgccaggtcccagaggtgaaaagggtaatgcaggacgaccgggaatacctggagct
cctggatcatttggagaaaaaggtgataaaggtggaacttgcatcgactgcttacccggt
ccgaaaggtgacaaaggagacagaggttttgacggcagagaaggagatattggacctaga
ggacctcccggcccgccgggagctatgggtcaaccaggacaagttggtatacctggtata
ccaggaaaaccgggcgcaccaggtaaagatggtaccgatggaccagacggacctccagga
gaccgaggattaccagctcaagtctcggaaagtttagttaaaggcaacaagggtgataaa
ggagagcaaggattaaacggcaggccaggaccgatcggtcctatgggtggccccggaccc
aaaggagataaaggtctggctggattcccaggagaaaagggagataaaggattaaagggt
tacgatggtgcggacggagttcccggcttagatggaacacctggacaaaaaggtcaaaaa
ggagatagtgttaaaggagaaatgggtcctccaggatttagcggaagcccgggagaaaaa
ggtgaacccggattacaaggtcctcaaggtaaagctggaagatgtgccgctaatattgtt
gcccaaatgaaaggcagtcaaggccctatggggccaaagggagaaccgggcatacctggc
ccacagggtttacctgggttaagaggcgaacccggtacgccaggacccaaaggaaataca
ggaccaatgggtcctccaggacctataggacgtcgtggtttaactggcccaagaggtgac
aaaggaaatgttggtcccatgggcttcccaggtgatcggggattggatggagccagaggt
ttacctggtctgattgggccaagaggcattaaaggagaacccggtattccacaggctggg
ccttcagggccaccaggtgtaatgggacttaaaggagaaaaaggtatcccgggattccct
ggtaaaccgggaccccacggcaatgacggattacaaggtttaatgggagaaaaaggtgat
atgggtgttgccggtttaaatggtcttgtaggaccaccgggacctaaaggagaacctggt
cctattggtccagcaggtattcctggaagtacaggaccacctggtcctcctggaccaaaa
ggacttcaaggattaaagggagaatctggaaaaccagggcttcctggtttcccagggcaa
aagggaaccaagggtgatttcggaccagcaggtttacctggactaaaaggagctatggga
cgaccaggaccttccggaaatcctggtcttaacggcagacctggtttaccaggagaaaag
ggagataagggttaccaaggaccaccaggtcttactggaataattggaatgccaggcgag
aaaggttactctggacttaaaggtgatagaggaccagaaggccgtccaggcttaccagga
cctcccggtctacccggtttgaagggtaacgccggaatacccggcttacatggcagaaaa
ggagaaccaggggcagcttccgagaaaggtcaaaaaggtgaacctggaatttcgggtcca
cgtggtcgcgatggcttgccaggagctccaggacctgaaggtcctaagggagatattggc
ttacctggtcaaggtctgccgggttatccaggccaaaaaggagaccgtggtacaccaggt
ttcgatggagcgccaggaacaccaggtaaaaagggagatacaggtgtcccaggttttact
ggccctaaaggagacaaaggtctaccaggaattcctggaagtcctggcatggatggaaga
gatggtctgacgggattaaaaggtgacagaggatttccaggaattccaggtataactgga
gagaaaggtgataaaggtcaagcaggacttaacggatacaatggatctccaggagaaaag
ggcatgccaggtcctttgggaccagaaggttatccaggaattaagggagatatgggagaa
agaggtcctccaggcattccaattacaattaaaggagacaaaggcgaaccaggtccccca
ggaattatcggtaaggacggagaaaagggagataggggactaccagggcctgccggtata
aagggagataaaggagatattggttttcctggactaaaaggagataccggatggccagga
ccagaaggaccaaaaggcgatcgaggtccggccggtctagccggattgcccggactaacg
attaagggagaaaagggacttccgggacttccaggtaaaaatggaagagagggagctcct
ggaccccagggagaaaagggtatcagtggaataccgggattagttggaagacctggcgta
ccgggacctccaggacctattggacttcaaggagctaaaggtgatagaggctttgacggt
cgaccgggaccagtaggacctcctggcccaccgggacgccctggactagatggtttgcaa
ggacctttgggcgagaaaggagatcgaggaccaccagggttaatgggagtgccaggcgaa
aagggtgatagaggtattccaggtgtaccaggaccagttggagtgcaaggtgaaaaaggt
gatagaggacttgacggactcacgggacctagaggcccaccaggaccacaaggtttcaag
ggagaactaggtgctcgtggagaagtgggagcgattggtttgataggtctcaaaggtgac
aaaggtgatagtggacggccaggccttcctggaccaaaaggtaacgccggactcgaagga
atgaaaggagcgcaagggttagatggtcgcccgggagtagatggatatcctggtacgcca
ggagcaataggtccaaagggtgataaaggatatcctggaccaccgggatcgccagggcgc
atgggtgaaaagggagatgccggtctggacggtaggcctggacttgatggtgtccctggt
atcgtaggcccgaaaggtgaccaaggagaaccatgtgtacaaacatcagattatctgact
ggaaccttattggtacggcacagtcaaagccgtgaggtgcctcaatgtgaagccggacac
acgaaattgtgggagggttattcgctcttgtatgtttcgggtaatgaaaaaccacacgcc
caagatctcggcatggcaggttcatgcgtcagaagattctcaacgatgcccttcgtattc
tgcgatatagacaacgtgtgcaactacgctaatagaaatgacaagtcatattggttatcg
accagtgccccaatacctatgatgccagtggaggaaaccgcaatccaagaatatatttct
aggtgtgtggtctgtgaaacaccagctaacgttatagcagtccatagtcaatccttgtct
ttaccggaatgtcctggtggatggtcttcgttatggatcgggtacagttttgtaatgcat
actggcgcgggtgctaacggaggaggccaatcgctatcaagtcccggttcttgcctagaa
gactttagatcgtcgccattcatcgaatgtaacggtgcccaaggtcactgccattatttc
tcgaacatgttgagtttctggctggcgactatcgagcaaagccaacagttccagaaaccg
cagaaacagacccttaaagctggcaacgtccgcgatagagtcagtaggtgtcaagtttgt
atcaaaaacacgtaa
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