Anthonomus grandis grandis (boll weevil): 126744251
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Entry
126744251 CDS
T08911
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg04382
Cornified envelope formation
agrg04512
ECM-receptor interaction
agrg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126744251
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126744251
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126744251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agrg04147
]
126744251
00536 Glycosaminoglycan binding proteins [BR:
agrg00536
]
126744251
Exosome [BR:
agrg04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
126744251
Glycosaminoglycan binding proteins [BR:
agrg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126744251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
126744251
NCBI-ProteinID:
XP_050307581
LinkDB
All DBs
Position
13:9734108..9785123
Genome browser
AA seq
1805 aa
AA seq
DB search
MTLRTGVCRAFALATLVFLTIVTQSDALGKCSGCAYPVKCNCTGIKGRVGAAGIPGLDGL
RGPPGDTGYPGGPGSKGEKGSDGNYGLVGDRGPRGDPGDRGPDGFHGTPGQIGLQGPEGP
EGLDGCNGTDGRPGTQGTRGYPGIRGSLGPEGDQGLRGEPGDGGGNSIGTKGDRGEAGYD
GLPGLVGPSGPSGMRGYQGLTGQQGIIGPQGAMGPPGEPGAERQGEKGLKGDQGEPGIKG
ESADDAGSQEEAPGSELLKGPPGDKGMKGEMGDKGWKGFYGAKGRRGIPGNKGAAGYKGE
RGEDGPLGKQGKTGPSGPPGEKGYKGAPGYEGSSGSDGLKGDRGQDGAPGVPGEQGYSGP
PGVYDPFLDKIIQGVPGRQGPQGYQGPPGVSGLPGFPGQSGPIGPPGPPGPPGQMGLPGI
KGISIKGERGDDGLPGVPGKTGQPGPQGPEGLAGEKGIKGETVVGPQGPSGIPGLDGFDG
PPGERGDPGDRGPKGFPGVGQPIRGPRGPEGPRGLPGFPGDNGIPGLNGWPGFKGRRGDD
CGVCRPGRAGARGDAGENGRNGRPGPIGFIGLPGSRGPQGFPGKQGPPGKDGLDGVPGTP
GLSGRPGPPGPPGILIYPPASLLNPEKGDVGLPGWPGREGPVGPPGIKGMAGEWGPPGVT
GPVGDHGDDGSSGRDGQPGRPGLLGQKGDRHDIPKEFLRGDQGFPGRQGPKGIQGDTGPM
GLEGTIENLVDLKGDRGQPGEPGDPGREGLPGLKGVRGNPGWPGLPGDQGPAGLSIPGPV
GLKGYPGIMGDEGPRGPSGQPGTPGEAGLPGGMGLKGERGNPGLPIIYGDIGLPGPTGPK
GEPGNEGPMGYPGFPGKPGIKGFKGTKGAPGYAGLPGPMGIKGQIGIHYPGPPGRPGAPG
LMGRPGDFGDFGEKGEDGEDGYPGIQGAKGDVGEFGFMGRPGDEGDIGLPGYDGANGLPG
LMGEPGQRGDIGYPGYPGPPGMKGNVGPRGDKGLIGDVGPNGLPGLPGDPGKTGPMGEPG
LPGLDGQKGESTFSGQKGEAGETGLIGPPGYDGFPGLQGPKGRIGDQGPNHVGAPGIRGP
KGEQGFPGRPGGFGFKGDVGDIGTPGSKGQSGDQGTPGFDGRPGFPGLEGARGVRGDAGE
PGLPGLKGQPGMEGEPGLIGLPGLPGPIGDPGPRGPLGRPGPKGNRGLPGMTLPGFAEKG
DRGEFGMFGLSGRKGQLGDYGAPGWPGVRGDRGRIGEPGIRGDTGAIGRKGPMGEEGIEG
MPGLPGQNPEPGEPGIPGQDGLPGLPGRVGQKGAPGEAGRDGPTGPQGRPGLSLNGIKGL
PGDAGLDGPEGPFGAEGLPGRDGRPGIRGPKGMTGDYGLPSGSFKGQKGDMGYAGSRGFP
GRKGERGDSGLPGFAGQPGYPGPIGLPGDIGPKGYPGFPGPTGPKGDAGDWGLNGFPGEP
GDEGLPGLVGMHGLPGRDGKNGLPGLPGLKGIMGDVGEPGLPGFDGRKGLPGAPGIPGRN
GNPGLTGRQGAKGEPAIPAPLPKSRGFNIVRHSQSEIVPVCPQNTVKLWEGFSLLHIHSE
KRTHGQDLGNPGSCIRRFNTMPYLLCNLNDVCDYANTNDYSYWLSTTEPVPMTMTPIYGH
DIQKYISRCSVCEAPTRAIAIHSQTSDVPQCPTGWDELWIGWSFMMGTDGGGGGSSQSLV
SPGSCLEDFRTKPFIECHAHGRCNHYASSLSFWLATIDEYAQFKKPVPQTLKSGYLTSKI
SRCAVCLRRMPSRADRVQPANLQTHYQPASPAYNPYGPQYRSYSNYRDKIPRRRRPQASY
YNRLG
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcggacgggtgtgtgccgggcttttgccttggcgaccctcgtatttcttacg
atagtgactcaaagtgacgctttgggcaaatgctcgggatgtgcttacccagtgaaatgc
aattgtacgggaatcaaaggtcgtgttggagcggcgggtattcccggattagatggctta
cgtggaccaccgggtgacaccggatatccgggaggtccagggagtaaaggtgaaaaaggc
tcggatggaaattatggacttgtaggagacagaggaccacgaggcgacccaggtgatcga
ggacctgacggatttcatggaacaccgggacaaattggtttacaaggacccgaaggtcca
gaaggcttggacggttgtaatggaacagacggaagaccaggaacacaaggtaccagaggt
taccctggaatacgtggttccctaggaccagaaggagatcaaggattgcgcggagaaccc
ggtgatggaggtggtaactcaatcggcacaaaaggagaccgaggtgaggccggatatgat
ggtctacctggattagtaggtccttcaggtccttcaggaatgagaggctaccaaggatta
acagggcaacaaggtattatcggtccccaaggcgcaatgggtcctccaggagaaccggga
gcagaacgacaaggcgaaaagggtttaaaaggtgaccaaggagagccgggaataaagggc
gagagcgctgacgatgcaggaagtcaagaggaggcccctggatcggagttacttaaagga
ccaccgggtgataaaggaatgaaaggggaaatgggtgataagggatggaaagggttttat
ggagccaaaggcagaagaggcatcccaggaaataaaggtgcagcgggttataaaggagaa
cgtggtgaggatggtccgcttggtaagcaaggtaaaacaggtccctccggtccacctggt
gaaaaaggttacaaaggtgcccctggatatgaaggatcatccggtagcgatggacttaaa
ggtgatcgaggccaagatggtgccccaggtgtacccggcgaacaaggttactcagggcct
ccaggtgtatacgatccattcctagacaaaataattcaaggcgttccaggacgccaggga
ccgcaaggatatcaaggcccacccggggtaagcggcctaccaggatttccaggacaatcc
ggcccaattggacctcccggtcccccaggacctccaggtcaaatgggtcttcctggtatt
aaaggtatttcaataaagggagaacgaggtgatgatggtttgcccggagttcccggtaaa
accggtcagccgggtcctcagggtccggagggtcttgctggagagaaaggtataaagggt
gaaacagtggtcggaccgcaaggaccttcgggtatacccggattagatggatttgatggc
ccaccaggtgaaagaggtgaccctggagatagaggaccaaaaggctttcctggagttgga
caacctataagaggacctcgaggtcccgaaggtccaagaggattgcctggtttccctgga
gataacggaatacctggtttaaacggatggccaggcttcaaaggtagaagaggcgatgat
tgtggcgtctgtagaccaggacgcgctggtgccagaggagatgctggagaaaatggcaga
aacggccgcccaggtccgattggctttatcggtttacctggcagcagaggacctcaggga
ttccctggtaaacaaggacctcctggaaaggacggattggatggtgttcccggaacaccc
ggtctgtctggacgtccaggaccgcctggaccacccggtatacttatttatccaccggcg
agcttattaaatccagaaaagggcgacgtcggattaccgggatggcctggtcgcgaaggt
cccgtagggccacctggaattaagggaatggccggtgagtggggacccccaggagttact
gggccagttggggatcacggagatgatggatcatcgggaagagatggacagcccggtcgg
ccaggacttctaggacagaagggtgatcgtcatgatattcccaaagaatttcttcggggt
gatcaaggttttccgggacgtcaaggaccgaagggtatccaaggtgatactggaccgatg
gggctggaaggtactatagaaaacttagtcgatttaaaaggagatcgtggtcagcccggt
gagcccggagaccctggtcgagagggtttaccaggtttaaaaggagtaagaggaaatcct
ggctggccgggtttgccaggagaccagggtcccgcaggtctatccattccaggacctgtt
ggcctcaaaggctacccaggaattatgggagatgaaggtccgagaggtccttcaggacaa
ccaggaactcccggagaagctgggttgccaggtggcatgggattgaagggcgaacgggga
aatcctggacttccaataatttatggagatataggtttaccaggacccacaggaccgaaa
ggagaacctggcaatgaggggcccatgggctatcccggatttccagggaaaccaggaata
aaaggtttcaaaggtaccaaaggagctccaggttatgcaggacttccaggtcccatggga
ataaaaggtcaaataggcattcactacccaggtcctccaggtcgtccaggtgcaccaggt
ttgatgggtagacctggagattttggagatttcggtgagaaaggcgaggatggtgaggac
ggatatcctggaatacagggtgctaaaggagatgttggagaatttggttttatgggaaga
cctggtgatgaaggagatatcggactgcctggttatgacggagctaatggattacctgga
ctaatgggagaacccggtcaaagaggagatatcggttatccaggataccctggaccaccc
ggaatgaagggaaatgtaggcccaagaggtgacaaagggctgatcggcgatgtgggacct
aatggactccccggtttacctggtgaccccggaaaaactgggcccatgggagaacctggc
ttaccaggtttggacggtcaaaagggtgaaagtacttttagtggtcaaaaaggggaagca
ggtgaaaccgggcttattggacctccaggatatgatggttttcccggcctacaaggtcca
aaaggtcgaataggcgatcaagggccaaaccatgttggggcgcccggaataagaggacct
aagggagaacaaggattcccgggcaggcctggaggatttggatttaaaggcgacgtaggc
gatatcggaactcccggttcaaagggacaatctggtgaccaaggaacacctggttttgat
ggcaggcctggctttcccggattggaaggtgcaagaggtgtgcgtggtgatgccggagaa
ccaggacttccaggtcttaagggacaaccgggaatggaaggagagcctggattaattggt
ctgcctggtttacccggcccaataggagatccaggtccaaggggtccactgggacgacca
ggtccgaagggtaatcgagggttgcctggtatgactttaccaggattcgccgaaaaagga
gatcgtggagagtttggaatgtttggattaagtggtcgcaagggacaactaggagactat
ggcgctccaggatggccaggagtgagaggagaccgtggtagaataggggaaccaggaatt
agaggagatacgggtgctataggtcgaaagggacctatgggtgaagagggcatagaagga
atgcccggattaccgggacaaaatcccgaaccgggagaacctggtataccaggacaagat
ggtttacccggtttgcctggtagggttgggcaaaagggtgctccaggtgaagccggacgt
gacggtccaactggaccacaagggcgtccaggtctttctctaaatggaatcaaaggtttg
ccaggagatgcaggtttagacggaccggaaggtcctttcggcgcagaagggttaccgggt
cgagacggtcggccgggtattcgaggtcctaaaggtatgacaggcgattacggactaccg
tccggaagttttaagggccagaagggagatatgggatatgctggctccagagggtttcct
ggaagaaagggggaacggggcgactctggattaccaggatttgcaggccaaccaggatac
cctggaccaatcggtttacctggtgacataggacctaaaggttatcccggttttcctgga
cctactggaccaaagggagatgctggcgattggggtttaaatggcttcccaggagagcct
ggtgatgagggtttacctggtttggttggcatgcacgggcttccagggcgagacggtaaa
aatggtttgccaggtcttccagggctgaagggcatcatgggagatgtcggagagcccggt
ctaccgggattcgatggtagaaagggcttacctggagctccaggtattccgggaagaaat
ggtaaccctggtttaacaggtcgccagggtgcgaaaggagaaccggcaataccagcacca
ctgcccaaaagccgaggttttaacattgttcgccattcacagtctgaaatagtacccgtt
tgccctcaaaatacggtcaagttatgggaaggtttctctcttttgcacatacacagcgaa
aaaaggacacatggacaagatctcggtaatccgggaagttgtattagaagattcaacacg
atgccttatttattgtgtaacctgaacgatgtgtgcgattatgctaacacaaacgactac
agttactggctctccactaccgaaccggtgccaatgaccatgactcccatttatggccac
gatattcagaaatatatttctagatgttcggtatgtgaagctcccactcgtgctattgct
atccacagtcaaactagtgatgtacctcaatgtcccaccggttgggatgaattatggatc
ggatggagtttcatgatgggaacagatggaggtggaggaggttcttcccaatcacttgtt
tcaccaggttcttgtctggaagacttcagaactaaaccgtttatcgaatgtcacgctcac
ggaaggtgtaatcattatgccagttccttgtctttctggctggcaactattgacgaatat
gcacaatttaagaagccggtgccgcaaaccttgaagtctggatatctgacttctaagatt
agtagatgcgctgtctgcctgaggagaatgccttcaagggcagatagggtgcaacctgcc
aaccttcagacccattatcaaccagccagtccggcctataatccgtatgggcctcagtac
agaagttattctaactacagggataaaatacctagaagacgtagaccgcaagcttcatat
tataatagactaggttaa
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