Anthonomus grandis grandis (boll weevil): 126745105
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Entry
126745105 CDS
T08911
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126745105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrg03041
]
126745105
03009 Ribosome biogenesis [BR:
agrg03009
]
126745105
Enzymes [BR:
agrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126745105
Spliceosome [BR:
agrg03041
]
Complex A
U2 snRNP components
U2 related factors
126745105
Complex B
126745105
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126745105
Ribosome biogenesis [BR:
agrg03009
]
Eukaryotic type
90S particles
Helicases
126745105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
ATPase
Flavi_DEAD
AAA_25
Microtub_bd
AAA_30
ABC_tran
TsaE
T2SSE
Motif
Other DBs
NCBI-GeneID:
126745105
NCBI-ProteinID:
XP_050308773
EnsemblRapid:
ENSAGSG00005013580
LinkDB
All DBs
Position
15:complement(383399..398250)
Genome browser
AA seq
718 aa
AA seq
DB search
MSKRRIEVGEPALKKKSSNVRDEKPVPVTQYSLGGTVSGNPYTGLPYTQRYHELYRKRIG
LPVFEYRNDFMRLLSENSCIVLVGETGSGKTTQIPQWCVEFARSVGRKGVCCTQPRRVAA
MSVAQRVSEEMDVALGQEVGYSIRFEDCSSAKTVLKYMTDGMLLREGMSDPMLESYQCIL
LDEAHERTLATDILMGVLKEVIRQRNDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTPEPERDYLEAAIRTVIQIHMCEEIAGDVLLFLTGQEEIEVACKRIKREIDNLGP
EVGELKCIPLYSTLPPNLQQRIFEDPPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKHEMQDNT
YPEILRSNLGSIVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDL
GAVMAEFPLDPQLAKMLIASCNHNCSNEILSVTAMLSVPQCFVRPNEAKKAADDAKMRFA
HIDGDHLTLLNVYHAFKQSMEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFNLKRTST
DFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSTCLDHKPEWVIYNE
FVLTTKNYIRTVTDIKPDWLLRIAPQYYDLNNFPQCEAKRQLEILQNRMESRQYQQGF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaggagaatcgaagtcggcgagccagccttaaagaaaaagagttcaaatgtt
agggacgaaaagccggtgccagtaacacaatattcccttggcggcactgttagtggtaac
ccgtatactggcctcccatacacccaacgctaccacgaactctacagaaagagaataggc
ctaccggtgttcgaataccgaaacgatttcatgcgtcttttaagcgagaattcctgtatc
gtgcttgtcggtgaaaccggatccggcaaaaccacacagattccgcaatggtgcgtcgag
ttcgccagatctgtgggtcggaagggggtgtgctgtacccaacctagaagggtggccgcc
atgtcagtagctcagagggtgtcagaagaaatggatgtggctctagggcaagaggtcggt
tacagtattcgttttgaggattgttcgtcggcaaagacagttttaaagtacatgacagat
ggtatgttactgcgtgaaggtatgagcgacccgatgctggaatcttaccagtgtatattg
ctcgatgaggctcacgagagaactttagcgacggacatcctgatgggtgtcctaaaagaa
gttattaggcaacgcaacgatttaaaattggtcattatgtctgccacattggatgccggc
aagtttcagcagtatttcgataatgcccctttgatgaatgtgcccggaaggactcatccg
gtagagatattttatactcctgagccggagcgggattatttggaggcggccataagaaca
gtgattcagattcatatgtgcgaagagattgccggggacgttctacttttcctaaccggt
caagaagaaatcgaggtggcgtgcaaacgaatcaaacgtgaaatagacaacctcggtccg
gaagttggcgaactaaagtgcatcccgctctactcgacccttccgccgaaccttcagcag
cgaatcttcgaagatccgccgccgaacaagccgaacggagcgatcggtcgcaaagtggtc
gtatcgacgaatatcgccgaaacatcactaacgatcgacggggtcgtgttcgttatcgat
ccgggattcgccaagcagaaagtctacaatccgaggatccgagtcgagtcgttgctggtg
tcgccgattagtaaggcgtcggcgcaacagagggccggacgcgccggtcgcaccaaaccc
ggcaagtgtttccgcttgtacacggagaaagcgttcaaacacgagatgcaagataatact
tatcctgagattttaagatccaacttgggttctattgtgctccaactgaaaaaattggga
atcgacgatttggtccatttcgattttatggatccgcccgccccggaaactttgatgagg
gccctggagctgctcaactatttggccgcgttggacgacgacggcaacctgacggacttg
ggggccgtgatggccgaattcccgttggatccccagttggcgaagatgctgatcgccagc
tgcaaccacaattgttccaatgaaatactgtccgtaaccgcgatgttatcagtcccacag
tgtttcgtcagaccgaacgaggcgaagaaggcggccgacgacgccaagatgcgattcgca
cacatcgacggcgaccacctcacattgctcaacgtctatcacgccttcaaacagagcatg
gaagatccgcaatggtgctacgataatttcgtaaattaccgttcgcttaagtcggcggac
aacgttagacagcagctgtccaggatcatggacaggtttaacttgaagcgaacctccacc
gattttaccagtaaagactactacatcaatatccggaaggcgctcgtgaatggattcttt
atgcaggtggcccacttagaacgtaccggccattacttaacgataaaagataaccaaatt
gtccaacttcatccgtctacttgcttggatcataaacccgaatgggttatctataacgag
ttcgtattgaccactaagaattacatcagaaccgtaacggacattaaacccgattggtta
ttgagaattgcaccccagtactacgatctaaacaatttccctcagtgcgaggcaaagaga
caattggaaatattacagaacaggatggagtcgcgacagtaccagcaaggcttttaa
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integrated database retrieval system
