Anthonomus grandis grandis (boll weevil): 126746351
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Entry
126746351 CDS
T08911
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03022
Basal transcription factors
agrg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126746351
09124 Replication and repair
03420 Nucleotide excision repair
126746351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrg03021
]
126746351
03400 DNA repair and recombination proteins [BR:
agrg03400
]
126746351
Transcription machinery [BR:
agrg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
126746351
DNA repair and recombination proteins [BR:
agrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
126746351
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
DUF4543
Castor1_N
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
126746351
NCBI-ProteinID:
XP_050310528
LinkDB
All DBs
Position
17:7374932..7416223
Genome browser
AA seq
419 aa
AA seq
DB search
MGVSYLSSINLWPSAVKSNQPIKMDEDDAKEYRWETGYEKTWEAIKEDDDGFLEASVADI
ILRAKRRRQNQKQGHTKLGMMRHLFLILDCSEAMGSQDLKPTRMLCTLKILEGFIEEFFD
QNPISQMGIILMQNKRAEKVCELAGNFRKHIKYLKTLTKTNLVGEPSLQNGLEQALSSLK
LLPSHASREVLVIMGSLTTCDPTDISGTIDKLKQEGIRCSIIGLAAEVHICRTLATETKG
TYNVILDDSHYKDLLYQQVEPPPAAAALESSLIKMGFPHQMNTEGTDGPLTMCMCHIDST
EESSKLSTGGYYCTQCSSKYCELPVECRACGLTLVSAPHLARSYHHLFPPPNYQEIQFAT
QTAICYACQKPFGDADKQVYQCLTCQKIFCIDCDIFVHETLHTCPGCATDLATFQQSHS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggagtttcctatctaagtagtattaatctatggccttctgcagttaagtccaatcaa
ccaataaagatggatgaagatgacgccaaggaataccgctgggaaacgggttatgagaaa
acttgggaggctattaaagaggatgatgatggtttcctggaggcttcagtggcggatatt
atcttaagagcaaaacggcggagacagaaccaaaaacaaggtcacactaaacttggaatg
atgaggcatctgttcttaattttggactgttctgaagctatgggaagtcaagatttaaaa
cctaccagaatgttatgtacattaaagattctagaaggcttcatagaggaattctttgac
caaaatccaataagtcaaatgggaattattttaatgcaaaacaagcgtgccgaaaaggtt
tgcgagctggcaggaaattttagaaaacatatcaaatatttgaagactttaacaaagact
aatttggttggggagccttcacttcaaaatggattagaacaagcattgtcctctttaaaa
ttattgccatcacatgccagcagggaggtcttggttataatgggaagcttgactacatgt
gatccaactgatattagtggtacaattgataaactaaaacaggaaggcatccgttgctct
ataattggcctggcagcagaagttcacatttgtaggactttggcgactgaaacaaaaggc
acctacaatgttatattagacgatagtcactacaaagaccttttatatcaacaggtagaa
ccaccacctgcagctgctgcattggagtctagcctgattaaaatgggatttcctcatcaa
atgaatacggaaggaaccgatggaccacttaccatgtgcatgtgtcacattgacagtacc
gaagaaagtagtaaactcagtacgggcggttactactgcacccagtgttccagcaaatac
tgtgagcttccagtggaatgtagagcttgcgggctaactttggtctcagcaccacatttg
gccagatcataccatcatttatttccaccacctaattaccaagaaattcagtttgccacc
caaactgccatttgttatgcttgtcagaaaccttttggagatgcggacaaacaagtttat
caatgcctcacttgtcagaaaatattctgtatagattgtgatatatttgtccatgaaaca
ctccatacttgtccaggatgtgcgacggatttggcaacttttcagcagtcacacagttga
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