Anthonomus grandis grandis (boll weevil): 126746480
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Entry
126746480 CDS
T08911
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03020
RNA polymerase
agrg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126746480
09124 Replication and repair
03420 Nucleotide excision repair
126746480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrg03021
]
126746480
03400 DNA repair and recombination proteins [BR:
agrg03400
]
126746480
Enzymes [BR:
agrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126746480
Transcription machinery [BR:
agrg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126746480
DNA repair and recombination proteins [BR:
agrg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126746480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
126746480
NCBI-ProteinID:
XP_050310722
LinkDB
All DBs
Position
17:14270529..14283790
Genome browser
AA seq
1177 aa
AA seq
DB search
MAMYEQDFDQFDDEETEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRI
VEDAPAIELQAEAQHTSGEIEIPPKFLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNL
TYSAPLYVDITKTIIKEGEDPMETQHQKTFIGKIPIMLRSTYCLLNGLTDRDLTELNECP
LDPGGYFIINGSEKVLIAQEKMATNTVYVFAMKDGKYAYKAEIRSCMEHSSRPTSTLWVN
MMARGGQAIKKAAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMM
EMVKPSLDEAFVIQEQNVALNFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCE
TKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMY
AQKFIDKGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHLARAGVSQVLNRLTFAST
LSHLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQP
SPILEFLEEWSMENLEEIAPSAIANATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIV
SEVSMIRDIRDREIRIYTDAGRICRPLLIVENGQLLLKKKHIDNLKEREYNNYGWQMLVA
SGVVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHN
QSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGIN
SIVAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAESKKIGDQEEQFEKPNRQTC
QGMRNALYDKLDDDGIISPGIRVSGDDVVIGKTMLLPENDDELDGTTKRYTKRDASTFLR
NSETGVVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFT
CEGITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISTLLQE
YGYQLRGNEVMFNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEG
RARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHVCNFCGLIAIANMRNNTFEC
KGCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtacgaacaggactttgaccaatttgacgatgaggagacggaggaaatcagt
tctgaactgtggcaggaggcctgctggatcgtcatcaatgcgtatttcgacgaaaagggt
ctcgtaagacagcagctggacagttttgatgagttcattcaaatgtctgttcaaaggatt
gttgaggatgcccctgccattgaattacaagctgaggcccagcatacgagtggagagatc
gaaattcctccaaagtttcttgtaaaatttgaacagatttatttgtctaagccaacacat
tgggagaaggatggtgctccatcacctatgatgcctaatgaggccaggttgagaaatctt
acttattcagccccattgtacgtggatataacaaaaactattataaaagagggcgaggat
cctatggaaactcaacatcaaaaaacattcattggaaaaatccccattatgcttaggtca
acatattgtctgcttaatggactaacagatcgtgatttaacagaattgaatgaatgtcct
ttagaccctggtggttactttattatcaacggatcagaaaaggtactaattgcccaagaa
aaaatggccaccaacactgtatatgtatttgccatgaaagatggtaaatatgcttataaa
gctgagataagatcttgcatggagcacagctctagaccaacttcaaccctctgggtcaac
atgatggccagaggtggacaagccatcaaaaaagccgctattggccaaagaattatagcc
attttaccatatattaaacaagagatccctattatgatagtgttcagagctttagggttt
gtggcagacagagacatcttggagcacattatttacgactttgaggatcctgaaatgatg
gaaatggtcaaacccagtttggatgaggcatttgtaatacaggagcagaatgtggccctg
aatttcatcggtgcgaggggagccaggcctggagttactaaggagaggcgtattaagtat
gccagggaaattttacaaaaggaaatgttgcctcatgttggtgtgtctgatttttgtgaa
accaagaaggcttactttttaggatatatggtacatcgtctcttacttgctgcactggga
agaagagaactggacgacagagatcactatgggaataaaagattggacttggcaggtcct
ttactagctttcctatttagaggtttattcaagaatctaatgaaagaggtcagaatgtat
gctcaaaagttcatcgacaaaggcaaagactttaacttagacttggcgattaagacaaaa
cttatcaccgatggcttgaggtattctttggccacaggcaactggggagatcagaaaaag
gcccatttggccagagctggggtatctcaggtattaaaccgactgaccttcgcctcgacc
ctctcccatttacgtcgcgtaaactcccccataggacgcgacggtaaactggcgaaaccc
cgtcaattgcacaacaccctgtggggcatgatctgccccgcagaaacaccggagggggcc
gccgtaggtctcgtgaaaaatctcgccctcatggcctacatctccgtcggttctcaaccc
tcgccaatcctcgagttcttggaggaatggtccatggagaacctggaggaaatcgccccg
tctgctattgcaaacgccactaaaatcttcgtaaacggttgctgggtgggcatccacagg
gatccggaacaactgatggccactttaaggaaattgagacgtcaaatggacattattgtg
tccgaagtgtcgatgattcgggacatccgagacagggagattagaatttacaccgatgcc
ggcaggatttgtcgtccgttgcttatcgtcgaaaacggacagctgttgctgaagaaaaag
cacattgacaatttaaaggagcgggagtataataattacggttggcagatgttggtggcc
tctggtgtagtggagtatatcgacaccctggaggaggaaactgtcatgattgctatgtcc
cctgacgatttgaggcaggagaaggagtacgcttattgcaccacttatacgcattgcgaa
attcatccggcgatgattttgggggtgtgcgcctcgattattccgttccctgatcacaac
cagagccccaggaacacttatcaaagtgccatgggtaaacaggctatgggtgtttatatc
acaaacttccacgtgcggatggacactttggcccacgtcctttactacccgcataaacct
ttggtaacaaccagatcaatggaatatctacggttcagagaattaccggcgggaattaac
agtatagtggccatcgcctgttataccggatacaaccaagaagactccgtcatcctgaac
gcttctgcagtcgaaagggggttcttccggtcggtgttttatcgttcctacaaggatgcc
gagtcgaaaaagatcggagatcaagaggaacagttcgagaaacccaacaggcagacctgc
cagggcatgcggaacgctttgtacgataaactggacgatgacggtattatttcgcccggt
ataagagtgtccggtgacgatgtcgttattggaaaaaccatgttattgcccgaaaacgat
gacgagctggacggtacgacaaaaagatacacaaaaagggacgcctcgacgttcttacgt
aacagtgaaaccggggtggtggatcaggtgatgttgaccctaaactcggagggttataag
ttctgtaaaatcagggtgcgatcagtgagaatcccacaaatcggggacaaattcgcctcc
aggcacgggcaaaagggtacttgcggaatccagtacagacaagaggatatgccgttcact
tgtgaaggaatcacgcccgatattataattaatccccacgccatcccgtctcgtatgacg
attggtcacttgatcgagtgcatccagggaaaagtgtcctcgaataagggagaaatcggc
gacgccaccccctttaacgatgcggtgaatgtgcaaaagatttcgacactgttacaggag
tatggataccagttaagaggaaatgaggttatgttcaacggtcacaccggccgcaaaata
aacgcgcaaatcttcttgggccccacttactatcagcgtctcaagcacatggtggacgac
aaaatccattcgagggcccgcggtcccgtccagatcctcgtccggcaaccgatggagggc
agagcgagggacggcggtttacgtttcggcgaaatggaacgcgattgtcaaatatcgcac
ggggctgcccagtttttgcgcgagagattgttcgaagtgtcggatccgtacagggtgcac
gtgtgcaacttttgcggtttgatcgccatcgcgaatatgcgaaataacacgttcgagtgt
aagggttgcaaaaataaaacgcagatttcgcaggtgaggttgccgtatgcggccaagttg
ctgttccaggagcttatgtcgatgaacatcgctcctaggttgatggtactttaa
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