Anthonomus grandis grandis (boll weevil): 126747841
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Entry
126747841 CDS
T08911
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126747841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agrg03041
]
126747841
Spliceosome [BR:
agrg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126747841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_like
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_HPS5
Nbas_N
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
126747841
NCBI-ProteinID:
XP_050312702
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Position
20:complement(7605816..7610522)
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AA seq
510 aa
AA seq
DB search
MSDDEITYVKKTKTIHYGSLEDQERARMEVASEGSDSDSMEGEPIKPPAPPPPEENNEYI
ELEEAMARDKQALLEEFERRKKARSINVSTDDGEVKRNLRQLGEPICLFGEGPAERRSRL
RDILSRLGEDSVIRREAEEERKQFEKDQEQTWYHEGPDSLRIARLWIAHYSLPRAKERLM
EARRLLELPATTKTARYQEVQKKIHQMAIYSSQVGDNRPISYCTFSPNSKLLATASWSGL
CKIWSIPDCELKQTLKGHTCNVGAIVFHPKATLSQEETICNMASCASDGSVKLWDFKNEE
PIADIEGHVPHRVSRIAFHPSGRFLGTCCFDNSWRLWDLEQCTEVLHQEGHAKPVYCLSF
QGDGSVCASGGLDSFGRVWDLRTGRCIMFMEGHLKSIYGIDFSPDGYHLATGSEDNTCKI
WDLRKRSVLYTIPAHNNLIADVKFQKIEGNFLVTASYDGKVKIWSNKTWQPLKTLSGHDG
KIMCCDVSADNEFIVTSSYDRTFKLWAPEQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaaattacatacgtaaaaaagacgaaaaccatccattatggatccctg
gaagaccaggaacgagcccgcatggaagtcgcttcggaaggtagcgacagcgattcgatg
gaaggtgaaccaattaagcccccggcgcctcctcctccggaagaaaacaacgagtacatc
gaactggaggaggcgatggcgcgagacaaacaggccctactcgaagagttcgagagaaga
aagaaggcccgctctatcaacgtctcgactgatgacggcgaggtgaaacgaaacctgcgt
cagctgggcgaacccatttgcctcttcggcgagggccccgccgagagacggagcaggtta
agggacattttaagccgattgggcgaggactctgtgataaggagggaggccgaggaggaa
cggaaacagtttgagaaggaccaggagcagacgtggtaccacgaggggccggactccttg
agaatcgccaggttatggatagcccactattcgttacctagggcgaaagagagactgatg
gaggccaggaggttattggagctgcccgctaccactaagacagccagatatcaagaagtg
caaaaaaagatacatcagatggcgatatactcctcacaagtgggagacaacagaccgata
tcgtactgcaccttctcgcccaattccaaacttttagccaccgcctcgtggagcggtctc
tgcaaaatctggtcgatacccgactgcgaactgaagcaaacccttaaaggacacacctgc
aacgtgggggccatagtgttccacccgaaagccaccttgtcgcaggaggagaccatatgt
aacatggcctcctgcgcctcggacggttcggtcaaactgtgggactttaaaaacgaggaa
ccgatcgcggacatcgagggtcacgtgccccaccgggtgtcccggatcgcgtttcatccc
tcgggcaggttcttgggtacctgctgcttcgataactcgtggcgactgtgggacctggag
cagtgcaccgaggtgctgcatcaggaggggcacgcgaaaccggtctattgtttgtccttt
caaggtgacgggtcggtgtgcgccagcgggggactggactcgttcgggagagtgtgggat
ttgaggacgggcaggtgtatcatgttcatggagggacatttgaagtcgatttacggaatc
gacttctccccggacgggtaccacctagcgaccggcagcgaggacaacacctgcaaaatc
tgggacctgcggaaacggtcggtcctctacacgatcccggcccacaacaacctgatcgcg
gacgtcaaattccagaaaatcgagggaaacttcctggtcaccgcctcctacgacggcaaa
gtgaaaatctggtcgaacaagacgtggcaaccgctgaaaacgctgtcgggccacgacggg
aagatcatgtgctgcgacgtttcggccgataacgagttcatcgtcacgagctcgtacgat
cgcacctttaagttgtgggcacccgagcagtag
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