Anthonomus grandis grandis (boll weevil): 126747889
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Entry
126747889 CDS
T08911
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
agrg04121
]
126747889
Ubiquitin system [BR:
agrg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
126747889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
126747889
NCBI-ProteinID:
XP_050312760
LinkDB
All DBs
Position
20:5795088..5935939
Genome browser
AA seq
1728 aa
AA seq
DB search
MCSWSSEPESVCNNWRGWKKPTNNNQSGFYGGSKRSPEVPSLTELAAKCVASHIPFELVE
HVYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLANGSADEFSRGDNLYRNRMVQDPLQIGF
HLSASVQQARYNNSPASTHNVAVTFDRRRISSCNCTCQSPAYWCSHIVAVCLTRIHLPET
VTLRAPVSESLSRLHREQLQKFAQYLISELPQQILPTAQRLLDELLGSQPSAINSVCGAP
DPTAGASANDQTSWYLDEKTLHDNIKKILIKFCVPAPMVFSDVNYLSTVAPPAAAEWSSL
LRPLRGREPEGMWNLLSIVREMFKRNDRNAVPLLEIITEECMACEQILIWWFNTKVALLS
GSSSHGGSGGGKHNNINSNTHASQHAGSSLCDEVVVLWRLAALNPGLAPSERDMLHSQFT
TWHMKILEKVSKCRNTTTSSGSNYYKNASSLKADLEIFTGFKPAIEACYLDWDDYPMPGI
TYTSDINPMYHCPFTCFRHGPDSIRGEGQVPQVNSSKAVLNCEPVVHHHAHHRHHYHSIR
NHRLGYLNVMSLNPVEYPAHPHINHLNERDGNRSSVSSEGFCEVDDDINIINPARNFNDS
DSQEGGGSDSSSSSTSSSRDSNTPVALNRCGLDNALGDTPETVVVKDTVDNSCDSEACLD
EKWPKFEPTTDTEEESRRQSKDESSSSESPNSGDEYCIYFYNRSHEEGNSPDKPSTSHVG
ALAADQTDGKSDVFSEIRKCNDPWDVLFARAEGLYAHGHGREACILGVKLAEELLANPPN
LMIEVPQIPKKKGKKSYVNPATHQLSVVASGTLSKGGFLCSVLSENPEHFHLAFRVGMFG
LEMARPPASTKPLEVKLANQEVELVNQLKRLPLGHKELQILRKRAEQIKDGTLKSRGEAM
LPIMLASFIFDALVIPSIVGRDRSKILHLRLPTDEPLAFEAAVVALGLKANVSEADHPLL
CEGTRRQRGELAISLLTFYKDDCYKICRIMDKLLDREVHQLLKTPLISSYYTNNPPIRSQ
FNTPRREDCDSTIAPISQFMPPTDVLPNDCNNSRPHSSTSAEVEQGVANLALNGQGSQIA
QGAVSRTKDGRYKKRAYPSIPNQPSEAGAHFMFELAKTVLTKAGGTSSTSLFTQPSSTQS
HHGPHRALHMCAFQLGLYALGLHNCVSPNWLSRTYSSHVSWITGQAMEIGAAAISFLIDT
WEGHLTPTEAASISDRASRGCDINMVSAAANLAISVLPHSHALNPNEIQRAILQCKEQSD
DMLEHACLTVESAAKGGGVYPEVLFQVAKYWYELYIRHTPGGEQLIDADLPVHDSLIDPH
AQLVALIEPPVSGDGAATATPVVVTTAPPPYQHGAPPVGMYLSHYNFLPAHPTGTPMGYA
GPIPSLAPAAQHVHVQYQFPYPPPQPGNQPMPPFPPPLAAPAYAALPPPTTTQQMPFPNT
PTVAPQYTIQSTSQYAAPPPPPASYVNATLPSQLQQPPGAVFSSPPPSAGGGGGAPPPLQ
YFGPNAVPLQAPQGARGQHMFGQLPPGMAPPHPFIRPHRPQQLNQAQLRYLLTAYRVGML
AMDTLARRVHDDRPQAKYARNPPYGEDVKWLLRISKNLSTHHLHHFCVCAVNSIVSPFVL
HDVAIEAAQHLSRNNPGLVMQHLRTALMPLVNKCQQMYIQCMHQKLYHLTTGDYEDFVSI
VLAARAAFHITPEGNVQFKEWLSSIRRSKSCKKDLWQQINQALQSNSK
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagttggagttcggaaccggagagtgtgtgcaacaactggaggggatggaagaaa
ccgaccaataacaaccaatccgggttttacgggggttctaaaagatcaccagaagtacca
tcgttaaccgaactggcagcgaaatgtgtcgcctcccacatcccttttgagttagtcgag
cacgtttatccgccggttcctgagcaactgcagcttcgcatagcgttctggagtttcccg
gataacgaggaggacattaggttgtactcgtgtttggcaaacggatccgcagacgaattc
tctcgaggagataacttgtacaggaaccgtatggtgcaagatccgttgcaaattgggttc
catttgtctgcgagtgtgcaacaggccagatacaacaactctcccgcttccactcataat
gtcgcggtcacgtttgataggaggagaatttcgtcttgtaactgtacctgtcagtctccc
gcttactggtgttcgcatatcgtggcagtttgtctcaccagaatacatttgccggaaacg
gtcactttacgagccccagtatccgaatctttatcgagactccatagggagcaactgcaa
aagttcgctcagtatttgatcagtgaattaccgcagcagatactgcctactgctcaacga
cttttagatgaattgctcggatctcaaccttctgccatcaattcggtgtgtggagcaccg
gatcctaccgcgggagcctccgctaacgaccaaacgtcctggtatctggacgaaaagact
ctgcacgacaacattaagaagattcttattaagttttgtgtgcctgcaccgatggtattc
agtgacgtgaactacttgagcacagtggcgccccccgccgccgcggaatggtcctcacta
ctacgaccattgagaggccgagaaccggaaggcatgtggaatttactgagtatcgtacgg
gaaatgttcaaacggaacgaccggaatgcggtaccacttttggagattattaccgaggag
tgtatggcttgcgaacaaattctaatttggtggtttaacacgaaagtggccctcttaagc
ggttcctccagtcacgggggttccggagggggtaaacataacaacatcaacagtaacacg
catgcgtcacagcacgccggatcttctctatgcgacgaagttgtggtactttggcggtta
gccgccctaaatcccggattggcgccttctgagcgtgacatgttacatagtcaattcaca
acgtggcacatgaaaatcctggaaaaggtgtcaaagtgccgaaacacgaccacctcatcg
ggttccaactattacaaaaacgcgagttccttaaaagcggacttagagatattcaccggg
ttcaaaccggctatagaggcctgttatttggactgggacgattatcccatgcccgggatc
acttacacttcggacattaatccgatgtaccactgtccattcacttgtttcagacacgga
ccggacagtataaggggagagggacaggttcctcaagtgaactcctcgaaagcggtacta
aattgcgagccggtggtgcatcatcacgcccaccacaggcaccactatcactcgatcagg
aaccaccggttggggtacctgaacgtgatgtccctaaatccggtcgaatatccggcccat
ccgcacataaaccatttgaacgaacgggacggtaatagatcgagcgttagtagtgaagga
ttttgtgaggtcgacgacgacataaacatcatcaaccccgcgcgtaactttaacgactcg
gactcgcaggagggtgggggtagcgactcgtcgtccagtagcacgagcagcagcagggac
agtaacacccccgtggcgttaaaccgttgcggtttagataacgcgttgggcgatacaccg
gaaactgtcgtcgtcaaggatacggtcgataattcttgcgattcagaggcgtgcttagac
gaaaaatggcctaaattcgaacctaccacggacacggaggaggaatcgaggagacagtcc
aaggacgagagcagcagctcggaatccccgaattccggggacgagtattgtatttatttc
tataataggtcacatgaggagggtaattcgcccgataaaccgtctacaagtcatgtgggt
gccttagcggcggaccagaccgacgggaaatcggacgttttctcggaaatccggaagtgt
aacgacccttgggacgttttgtttgccagggcggagggtctgtacgcccatggacacggt
agagaggcctgcatcctgggtgttaaattagccgaggaactgttggctaatccacccaat
ctgatgatcgaagtacctcagatcccgaagaagaaaggaaagaagtcttatgttaatccg
gcgacgcatcagctcagtgtcgtagcatcggggactttatctaagggtggctttttgtgt
tcggttttatcggagaacccggaacactttcatctggctttcagggtgggtatgttcggt
ttagaaatggcccgacctcccgccagtacgaaacctttagaggtaaaattggcgaatcag
gaggtggaactggtgaatcaattgaaaagactgcctttaggacataaggagttacaaatt
ttaaggaaacgagccgaacaaattaaagacgggaccctaaagtctcggggcgaagccatg
ctgcccataatgttggccagtttcatttttgacgcactggtcataccctctatagtgggt
cgagatagatcgaaaatcctgcacctaagattgccgacggacgaaccgttggcgtttgag
gcggcagtggtggcgttgggtttaaaagcgaacgtttcagaggcggatcatccgcttttg
tgcgagggaactagacgacaaaggggggaacttgcgatttccctgttgacgttttacaag
gacgattgctacaaaatttgccgaatcatggacaaactactggatagggaggtgcatcag
ttattgaaaacgccattgataagttcgtactacacgaacaatccaccgatccgaagtcag
tttaatacgcccagaagggaggactgcgacagcactatcgctcccataagtcagtttatg
ccgcctaccgatgtcttaccaaacgactgtaacaacagtaggcctcacagttccaccagt
gccgaagtggaacaaggggtggctaatttagcccttaacggtcaagggtcgcaaatagca
cagggtgcagtttcaaggactaaagacggaaggtataaaaagagagcgtatccttcaata
cccaatcaaccttcggaggcgggggcgcattttatgttcgaattggccaaaacggttctc
actaaagccggtggtaccagcagtacctccttgttcacccaaccgtcatcgacgcaaagt
caccacggtccacacagggctttgcacatgtgcgcttttcaattaggactgtacgcttta
ggactacataactgcgttagtccgaactggttgagtaggacttatagctcacacgtttct
tggataacaggtcaagcgatggaaatcggagcagcagcgatttcattcctcatcgacacc
tgggagggtcacctgaccccaacagaggccgccagtatatccgacagggcgtctcgcggc
tgcgatattaacatggttagcgccgccgctaatctggccatttccgtcctaccgcattcg
cacgccctaaacccgaacgaaattcaacgtgcgatcttgcaatgcaaggaacaaagtgac
gacatgctggaacacgcgtgtttgaccgtggaaagtgccgctaaaggtggcggcgtttat
ccggaagttctctttcaggtggcgaaatactggtacgaattgtacattcgacatacgccc
ggtggggagcaactcatcgatgccgatctgcctgttcacgattctttaatagatccccat
gcacaattagtcgccttaatagaaccgcccgtatctggcgacggagcagcaacggcaacc
ccggtggtggttacgaccgcccctccaccatatcaacatggggctccccctgtcggcatg
tacttgagccattacaacttcttaccggctcatcctacgggaacccccatgggatacgca
ggtccgataccatcgttagccccggcagctcaacacgtgcacgtccagtaccagttccct
taccccccaccacaaccgggaaatcaaccgatgccgcccttcccgccaccgctggccgct
cccgcctacgccgccctaccgccccccactacaactcaacagatgccttttccgaacacg
cccacggtagcaccgcagtacaccattcagtcgacgtcgcagtacgccgccccgcccccg
cccccggcctcatacgtaaacgcgacgctgccgagtcagctacagcagccgccgggggcg
gttttttcaagtccgcccccgtcggcgggcggcggcggcggcgcccccccgcccctgcag
tacttcggaccgaacgcggtaccgctacaggcgccccaaggggcccgagggcagcatatg
ttcggacaactaccgcccggaatggctccgccacatccgttcataagaccccaccgtcca
caacagttaaaccaagcacaacttcggtatttactgaccgcataccgcgtgggaatgttg
gccatggacactttagctcgacgagtgcacgatgaccgaccgcaggccaaatacgcccgg
aatcccccttacggcgaagacgtgaagtggttgttgaggatctcgaaaaatcttagtacg
catcacctgcaccacttctgcgtttgcgcggtcaactcgatcgtgagcccctttgtgctg
cacgacgtggcgatcgaggccgcgcaacatttgtcgcgcaacaaccccggcttggtcatg
caacatttgcgcaccgccctgatgccccttgttaataaatgtcagcaaatgtatatacag
tgtatgcatcagaaactttaccatttaaccaccggagattacgaggatttcgtcagtata
gttctggcggcgagggcggccttccacataacccccgagggcaatgtacagtttaaagaa
tggctctcgtccatcaggaggtcgaaatcgtgcaaaaaagacctgtggcaacagatcaac
caggcgctgcaatcgaactccaaatga
DBGET
integrated database retrieval system
