Anthonomus grandis grandis (boll weevil): 126748007
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Entry
126748007 CDS
T08911
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03013
Nucleocytoplasmic transport
agrg03015
mRNA surveillance pathway
agrg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126748007
09122 Translation
03013 Nucleocytoplasmic transport
126748007
03015 mRNA surveillance pathway
126748007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126748007
03041 Spliceosome [BR:
agrg03041
]
126748007
Enzymes [BR:
agrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126748007
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126748007
Spliceosome [BR:
agrg03041
]
Complex C
Other components
EJC/TREX
126748007
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126748007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
CMS1
MoaE
DUF5040
Motif
Other DBs
NCBI-GeneID:
126748007
NCBI-ProteinID:
XP_050312969
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All DBs
Position
20:complement(4928972..4946029)
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AA seq
273 aa
AA seq
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MADTEDLLDYEDEEQTEQTTNEASTEVKKAVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMSNIKVGVFFGGMPIQKDEEVLKNNCPHIVVGTPGRILALVKSKK
LNLKNLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKDIRPVCKKFMQ
DVIYYYTLLLLLLLALPLVFGARFTDVPVSSTT
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagaagatcttcttgattatgaagacgaggaacagaccgagcagaccacc
aatgaggcctcaacagaagtcaaaaaggcggtgaagggtacatatgtgtctatccacagt
tctggcttcagggatttccttcttaagccggaaatcttgagggctattgttgattgtggt
tttgagcatccctctgaagtgcaacacgagtgtatcccgcaagcggtcctgggcatggac
atcctctgtcaagcgaagtccggcatgggcaaaacggccgtgttcgttctcgcgacgttg
cagcaactcgaaccgaccgagaacgtggtctacgtgctcgtcatgtgtcacacgcgggag
ctcgccttccaaatcagcaaggagtacgagcgtttcagcaagtacatgtccaacatcaag
gtcggtgtgtttttcgggggcatgcccatccagaaggacgaggaggtgctgaagaataac
tgtccgcacatcgtggtcggcaccccggggcgcattttggccctggtcaagtccaagaag
ctcaacctgaagaatctcaagcactttatactggacgagtgcgacaagatgctggaattg
ttagatatgcgtcgcgacgtgcaagaaatctaccgcaacacgccgcacggcaaacaagtc
atgatgttcagcgccaccctcagcaaagacatccgaccggtctgcaagaagtttatgcaa
gatgtaatttactactacactttactactactactactactagcactaccactagtattt
ggcgctcgttttaccgacgttccagtatcatcgacaacttga
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