Anthonomus grandis grandis (boll weevil): 126749439
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Entry
126749439 CDS
T08911
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126749439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126749439
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
126749439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
126749439
NCBI-ProteinID:
XP_050315091
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Position
1
Genome browser
AA seq
946 aa
AA seq
DB search
MEKEKGQENPVEDENTAMPPSEETSDIIPGYKSIDDFTKDGFKILMEGIKHANALPSGND
LNFYRTFESFNNINKSQSAQILTNISNLLKKTEVGGNIYNQTVDKKTEILIDANDIILER
IANDIDEMNGIRKFFNEPVVLHTVSAQVPANINGSWNRSNVKFSMSDNIVTKDTSTKTNA
TTIRLLAGENILRPQKFFKDKINNNNDYPWEPRIRDKPNSLKPLAIFLEETENGKEFSHP
YEFELDRFTPAENLLKKTEITPPKPIQNTPLIEINTPEQLPELLEDLQKFQFIAVDVEHH
SYRSFMGITCLVQISTPEKDYLIDALALRNDLWVLNEVFTKPSITKIFHGADSDIPWLQR
DLSLYVVNMFDTHQAAKQLGYSGLSLAYLMRRFCSFTPNKQFQLADWRIRPLPTELKNYA
REDTHYLIYIYQNMRNELIDKGNGKSNLLKAVIGQSTALCLKRYLKPIWNVQSHMEFYRR
CHRNFDNRQLFALREIYKWRDRLARSEDESTGYVLPNNMLLEISGRLPKEMQGILACCSP
VPPLLRANLLEIHKIILKALEQPFEEPILKEPTRARGSTKKMTKINIDSPLHCPHDLTKS
DEFRDDLPTLLRSPEKQDIKSLLTAKHQWEHTKSICSVFNSAINEVIEKEKSSIEKLRKF
KENFKFLGPFERYTLVKPFIESRERKIAEERKKLEEETKRDKDGGTQEERTDEERIESIR
EHFLSLARQALPTEASTHSPKKMSLLEMGGSKKRKRDESPMDPLECAELEHNVQTPLPNF
KIKLHTNVDKSAAERNSAKRKSCEADPGPSKVSDNCRTDGSSKKKFSPKKKGKNRNQQNS
MHQDSITQDPTNDKPKAPNKANKNKNKRSKNNNKNKKPPAKEEHNQSEEFNAYDYATVDF
KQFQGGAGRGEQKKQFNSKFRGKNRNRGGRGRGQKAKAMSFKQATK
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaaaaaggtcaagaaaaccctgtagaagatgaaaatactgcaatgcctcct
agcgaagaaaccagcgacattattccaggttataagagcatagacgattttacaaaggat
gggttcaaaatccttatggagggcatcaaacatgccaacgcactaccttcaggcaacgat
ttaaacttttacagaaccttcgagtcgttcaataacattaacaaaagtcagtccgcccaa
atcttgactaatatctctaacttattgaagaaaaccgaagtcgggggcaacatttataac
cagaccgtcgacaagaaaacggagatcctcatagatgctaacgatatcattttagagcga
attgccaacgatatagatgaaatgaacggtattaggaagttctttaatgaacccgttgtg
ttgcatacggttagcgcccaagtacctgctaatattaatgggtcttggaacaggagtaac
gtgaagttttctatgtccgataatattgtaactaaggatacttcaactaaaacgaatgca
accactatacgccttctggcaggagagaacatcctgaggcctcaaaagtttttcaaggat
aagataaataataataacgattatccttgggagccgaggataagggacaaaccaaactcc
cttaagcctttagcaatctttttagaggaaactgaaaatggaaaggagttttctcaccct
tacgagtttgaactagacagattcaccccggcagaaaatttactaaaaaaaactgaaata
accccaccgaaacccatccaaaatactccgctcatagaaatcaatacgccagagcaactt
cccgaattgctagaggatctacagaagttccagtttattgctgttgacgtggaacatcat
tcgtatagatcttttatggggataacgtgtctagtgcaaatttctacccccgaaaaggat
tatttgatcgacgctttagctttgaggaacgacttgtgggttttgaatgaagtgtttact
aaacccagtataactaagatttttcatggtgccgactcggacatcccttggctccaaagg
gacttatccctctacgtggtcaatatgttcgacactcaccaggcggccaaacaactcggt
tattccgggttatcattggcgtatctgatgagacgcttttgtagttttacgccgaataaa
cagttccaattggccgattggcggatacgtcccttacccacggaattaaaaaattacgcg
cgagaagacacccattacttgatatacatttatcaaaacatgaggaacgagttgatcgac
aaaggaaacggaaaaagtaatctgttgaaggcggttatcgggcaaagtaccgcgttatgt
ctaaaaagatacttgaaaccgatttggaacgtgcagagtcacatggagttttaccggagg
tgtcacaggaatttcgataacaggcagctgtttgctctgagggaaatttacaagtggagg
gatcgactggctagaagtgaagatgaaagtactggatatgtcttgcccaacaacatgcta
ctagaaatatccggtcgtttaccgaaagaaatgcaaggcatcttggcgtgctgtagtcca
gtacctccgctattgcgtgcgaacttactagagattcacaagataatcttaaaagcttta
gagcaaccattcgaagagcccatactgaaggagccaaccagagcgagaggatcgacaaag
aaaatgacaaaaattaacatcgatagtccccttcattgtcctcacgatttaacaaaatcc
gacgagtttcgagacgatttacccacgctactaaggtccccagaaaaacaggacataaaa
agtctcctgaccgctaaacaccaatgggagcacaccaaatcgatttgttcggtgtttaat
agtgctatcaatgaagttattgagaaggaaaaaagcagtattgaaaaacttcgaaagttc
aaagaaaacttcaagttcctgggcccattcgagaggtacactttggttaaaccatttatc
gaaagcagagagagaaagatagcggaagagcgtaagaagttggaagaggagacgaaacgc
gataaagatggtggtacgcaggaggaacgtaccgacgaagagagaattgaatcaatccga
gagcactttttatcgttggcccgtcaagcgttaccgaccgaagcgtcgacacactccccg
aaaaaaatgtcgctactagaaatgggcggcagtaaaaaacggaaacgggacgaatccccg
atggaccctttggagtgtgctgaactcgagcacaacgtgcaaacgcctttgcccaacttc
aagatcaaacttcacactaatgttgataagagcgccgcggagcggaatagtgccaagagg
aaatcgtgcgaagcagatcctggaccaagcaaggtctctgataattgtagaacggatggt
agcagtaaaaagaagtttagtccgaaaaagaagggcaaaaataggaaccaacaaaactct
atgcaccaagacagcataacgcaagatccgactaatgacaaaccaaaagcaccaaataaa
gcgaacaaaaataaaaacaaacgttcgaaaaataacaataaaaataagaaaccgccagca
aaagaagagcacaatcaatcggaggagtttaacgcttacgattacgcgacggtcgacttt
aaacagtttcagggtggagcaggacgtggcgaacagaaaaaacagttcaattcgaagttt
aggggcaagaatcgtaatcgaggtggtcgaggcagaggacaaaaggccaaagcgatgagt
ttcaaacaagcaacaaaataa
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