Anthonomus grandis grandis (boll weevil): 126750631
Help
Entry
126750631 CDS
T08911
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126750631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrg03021
]
126750631
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126750631
Transcription machinery [BR:
agrg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126750631
RNA polymerase I system
126750631
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
126750631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
KOW
KOW7_SPT5
KOW5_SPT5
Spt5-NGN
KOW2_Spt5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF150_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
126750631
NCBI-ProteinID:
XP_050316242
LinkDB
All DBs
Position
2:42736455..42773773
Genome browser
AA seq
1092 aa
AA seq
DB search
MSDSEGSNFSDNEQGSDAGSVRSRSSRGSVRSRQSRSPSRSRSPSRSKSRSRSRSGSVRS
RSRSGSRSRSRSRSRSRSRSRSRSRSGSRRSGSEAREASEPEEVQEEEEPDGQSLRDSEE
YDSEEEDSDEGGRSKKKKKKDRYGGFIIDEAEVDDEVEDEDEWEDGAQEIGIVSNELDEF
GPTAREIEGRRRGTNLWDAQKEHEIEEYLRKKYADDGAAAKHFGDGGEEMSDEITQQTLL
PGVKDPNLWMMKCRIGEEKSTCLLLMRKFLAFQNTPEALQIKSVVAPEGVKGYIYIEAYK
QPHVKAAIENVGNLRVGIWKQQMVPIKEMTDVLRVVKEQTGLKSKQWVRLKRGLYKDDIA
QVDYFDMAQNQVHLKLLPRIDYTRLRGALRTNQPEPENDKRKKKRRPPAKPFDPEAIRAI
GGEVTSDGDFLIFEGNRYSRKGFLYKNFTLNAVIVDGVKPTLTELEKFEEQPEGIDLELS
AEKEDKSVTHSFSAGDNVEVCEGELVNLQGKILSIDGSTIIIMPKHEDLKETLVFPANEL
KKYFKMGDHVKVLAGRYEGDTGLVVRVENNRVVLISDMTMHEMEILPKDLQLCSDMASGV
DSLGKFEWGDLVNIDAETVGVIVRLEKENFHVLNMHGKVVECRPGSLQKRRINRFTAALD
YNRNSLHRRDMVKVVDGPHSGFSGEIKHLYRNFAFLYSVEFLQNGGIFVCKTKHLQLAGG
SKIMPNADLTTGLEFMSPRRNSPMHPSSGGGGVAGGFGGGGRGGGRGRVIRDRDIIGTTI
KITRGPYKGNIGIVRDATQSTARIELHTSCQTISVDRNHICDVGTPAKDGSISSYGRTPA
YSGSQTPLYRDMGNKTPMADSGSRTPLHYGSMTPIHDGSRTPNASSEWDPSVPNTYPSPA
YNPSTPGGMNPPFTPQTPGGVYESSYSPYGYQSAISTPSPATGYGQSPSSNNPYNTPSSG
YSPSMPYNPQTPGAGLDVLPMTDWHTDDIEVRIRDSHDDGGLVGQTGIIRSVSGGMCSVF
LPEEDRVVNILADHLDPVRPQRGDEFKVIIGEEREQTGQLLSIDAHEGVVRFKDDITLLP
LQNLCKMRKMPH
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcagaaggcagcaacttttccgataacgagcagggctcggacgcgggctca
gtcagatcacgcagttcacgcggaagtgtccggtctagacagagtcgcagcccctctaga
tcccgatctcccagccgatcaaaatctagatcaagatcccgaagtggcagtgtgcgatct
agatccagaagcgggtctaggtccagaagcaggtcaagaagtagatctaggagtcgtagc
agaagcaggagtagaagtggatctagaagatctgggtctgaggcaagagaagcatcagaa
ccggaagaagtgcaagaagaagaagagcctgatggacagagcttaagagatagtgaagag
tatgactcagaagaggaggatagtgatgaggggggcagatctaaaaagaaaaagaaaaaa
gacagatacggtggatttattattgatgaggctgaggtggacgatgaagttgaagatgaa
gacgagtgggaggatggagcacaagaaattggaattgtttccaacgagttggacgaattc
ggtcctacagctagagaaatcgaaggaagacgccgaggcaccaatttatgggatgcccaa
aaagagcatgaaatcgaagaatacctgcgaaaaaaatacgccgacgatggtgcggcagcc
aaacattttggcgacggcggagaggagatgtccgacgaaattacccaacaaactttatta
cccggagtaaaggatcctaatttatggatgatgaaatgccgcataggtgaagagaaaagc
acctgtttgctgctgatgcggaaatttcttgcgttccaaaacacccctgaggccctacaa
attaaatcggtggtggccccggagggggtgaaaggctacatttatatcgaggcctataaa
cagcctcacgttaaggctgctatagaaaatgtgggaaatttacgggtgggcatttggaag
cagcagatggtgcccattaaagaaatgactgacgttttaagggttgtcaaagaacaaact
ggtctaaagtcaaaacaatgggtacgactcaaaagaggcctatacaaagacgacatcgcc
caagtggattactttgacatggctcagaatcaagttcatctcaaattgttgcccagaatc
gactatactagacttagaggggccctaagaacaaaccagcctgaacctgaaaatgataag
agaaagaaaaaacgtcgtccgcccgctaagccttttgatcctgaagcaatcagggctatc
ggcggtgaggttacatcggacggtgactttttaatattcgaaggaaaccggtactcgcgc
aaaggctttttatacaaaaatttcactcttaacgccgttatagtcgatggggttaaaccg
accttgaccgagctagaaaagtttgaagaacaacccgaaggcattgacttggagttatca
gcggaaaaagaagataaaagtgtgacgcattcattctctgcgggagataacgtcgaagta
tgcgaaggtgaattggtcaatttgcagggtaaaatcttgagtattgatggatcgactatt
attattatgccgaagcacgaggacttaaaagagacactagttttcccagcgaacgagttg
aaaaagtattttaaaatgggcgatcacgttaaagttttagccggtcgctatgaaggagat
accgggttggtggtcagggtggaaaataaccgagtggtgctcatctcggatatgaccatg
cacgaaatggaaattttaccgaaggatttgcaattgtgcagcgacatggccagcggagtg
gactccttgggcaaatttgaatggggagatttggttaatatcgatgcggagactgtgggg
gtcattgtgaggctcgaaaaagagaatttccatgtgttgaatatgcatggaaaagtagtc
gaatgtagacccggctctttacaaaaacgccgcataaaccggttcactgccgccctcgat
tacaacaggaacagtttgcatcgtagagacatggttaaagttgtcgatggccctcattca
ggcttttctggcgaaataaaacacctgtacagaaacttcgcctttttatattcggtggag
tttttacaaaacggggggattttcgtgtgcaaaaccaaacatctgcaattagcgggaggt
agtaaaatcatgcccaacgccgatcttactactggtttggaatttatgtctcccaggagg
aattcaccgatgcatccttccagtggtggcggaggagtggccggtggtttcggtggtgga
ggacgaggtggcggtagaggcagagtgatcagggacagagacatcatcggtacaaccatt
aaaattactagaggaccctataaaggaaacatcggtatcgttagggatgccactcagagt
accgctagaattgagttacatacttcgtgtcagactatctctgtggaccgtaaccacatc
tgcgacgtgggcactcccgccaaggacggttccatctccagttatggacgcactccggca
tattccggaagtcaaaccccactttacagggatatgggcaacaagacccccatggcggac
tctggatccagaaccccgttacattatggttcgatgacaccgatccacgacggttcgagg
actccgaacgcgtcttccgaatgggacccgagcgtgccaaatacttatccttctcctgcg
tacaatccaagtactccggggggtatgaacccgccgtttaccccccagactcccggtggg
gtctacgaatcttcttacagtccatatggatatcagagcgccatctctactccatctccg
gcaacaggttacggccaatcaccatccagtaacaatccgtacaacactcccagttccggc
tacagtccatcgatgccctacaatcctcagactcccggtgctggcctagatgtgttgccg
atgactgattggcatacagacgatattgaagtgagaattcgcgacagtcacgacgacggc
ggactcgtgggacaaaccggaattattcgtagcgtttccggagggatgtgttcggtattt
ttgccggaagaagatcgcgttgttaatattttagccgaccatttggacccagtcaggccg
caaagaggagatgaatttaaggttattatcggcgaagaaagagaacaaactggtcagttg
ctatccatagatgcccacgaaggggtcgtaagattcaaagatgacattactttgttgccg
ttgcagaatttgtgtaagatgcgcaagatgccgcattaa
DBGET
integrated database retrieval system
