Agrococcus sp. Marseille-Q4369: JSQ78_00050
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Entry
JSQ78_00050 CDS
T09684
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03420
Nucleotide excision repair
agro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JSQ78_00050
03430 Mismatch repair
JSQ78_00050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_00050
Enzymes [BR:
agro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JSQ78_00050
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSQ78_00050
MMR (mismatch excision repair)
Other MMR factors
JSQ78_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
Complex1_LYR_1
OpcA_G6PD_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
QUW19984
LinkDB
All DBs
Position
11540..13246
Genome browser
AA seq
568 aa
AA seq
DB search
MSREAKPDAERILEGLDEQQRLAATTLGGPVAILAGAGTGKTRAITHRIAYGVATGEQVE
HASLALTFTSRAAGEMRTRLARLGAGGVQARTFHAAALAQLSHFWPRVTGSRMPKLLPQK
ASTLADAAAQLRLRLPTAQLRDAAGEIEWRKSQAMTMEDYGVQARVRPLPTGITPEAMID
LHMAYERVKDERRLIDFEDVLLATTGMLEREPVVADEVRSRYRHFTVDEYQDVSPMQQQL
LAAWLGDRRDVCVVGDPSQTIYSFAGADPAGLQRFLHEHPDAELVRLERSYRSTGAIVGL
SNRLMRGRDALTLEAASGEHGAEPSVTEHASDSAEAAAIAAAVRAQVAAGADPGQIAVLT
RFHAQSGLIEQALASVGLSSTVRGSVRFFELPVVKRALMMLRSAPADGRPIFQAVTDIVI
GLGYRAEPPSSHGEERAQWDALHALVTLAEETGGTDLPAFAHDLQRRAATEHEPTVAAVT
IATIHAAKGLEWQHVHVCGLAEGLLPISHATSLAEVDEERRLLYVAITRAQRSLSLTWAR
SSGHAVRQPSRFLAELGAGRPAARAGSR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgaggcgaagcccgacgccgagcgcatcctcgaggggctcgacgagcagcag
cggctcgcggcgacgacgctcggcggcccggtcgcgatcctcgcgggcgccggcacgggc
aagacgcgcgcgatcacccaccgcatcgcctacggcgtcgcgaccggcgagcaggtcgag
cacgcgtcgctcgcgctcacgttcacgagccgggcggcgggcgagatgcgcacgcgcctc
gcgcggctcggggcgggcggagtgcaagcgcgcaccttccacgcggcggcgctcgcgcag
ctctcgcacttctggccgcgcgtcacgggctcgcgcatgccgaagctgctgccgcagaag
gcgtcgacgctcgccgacgccgcggcgcagctgcgcctccggctgccgaccgcgcagttg
cgcgacgcggcgggcgagatcgagtggcgcaagtcgcaagcgatgacgatggaggactac
ggcgtgcaggcgcgcgtgcgcccgctgccgacgggcatcactcccgaggcgatgatcgac
ctccacatggcgtacgagcgggtgaaggacgagcgccggctgatcgacttcgaggacgtg
ctgctcgccacgaccggcatgctcgagcgcgagcccgtcgtcgccgacgaggtgcgctcg
cgctaccgccacttcacggtcgacgagtaccaggacgtctcgcccatgcagcagcagctg
ctcgccgcgtggctcggcgaccgccgcgacgtgtgcgtcgtcggcgacccgagccagacg
atctactcgttcgcgggcgccgacccggccgggctgcagcgcttcctgcacgagcacccc
gacgccgagctcgtgcggctcgagcgctcctaccgctcgaccggcgcgatcgtcggcctc
tcgaatcggctcatgcgcggccgcgatgcgctcacgctcgaggccgcatcgggcgagcac
ggcgccgagccgagcgtgaccgagcacgcgagcgactcggccgaggccgccgcgatcgcc
gcggcggtgcgcgcgcaggtcgccgcgggcgccgacccggggcagatcgccgtgctcacg
cgcttccacgcgcaatcgggcctcatcgagcaggcactcgcgtcggtcgggctctcgtcg
accgtgcgcggctccgtgcgcttcttcgagctgccggtcgtcaagcgcgccctcatgatg
ctgcgcagcgcccccgccgacgggcggccgatcttccaagccgtcaccgacatcgtcatc
gggctcggctaccgcgccgagccgccgtcgagccacggcgaggagcgcgcccagtgggat
gcgctgcacgcgctcgtgacgctcgcggaggagaccggcggcaccgacctgcccgccttc
gcgcacgacctccagcggcgcgccgcgacggagcacgagccgaccgtcgcggccgtcacg
atcgcgacgatccatgccgcgaagggcctcgaatggcagcacgtgcacgtgtgcgggctc
gccgagggcctgctgccgatctcgcacgccacctcgctcgccgaggtcgacgaggagcgg
cgcctgctctacgtcgcgatcacgcgcgcgcagcgctcgctgtcgctcacgtgggcccgc
agctccggccacgccgtcaggcagccgtcgcgattcctcgcggagctcggtgccggcagg
cccgccgcgcgcgccggatcgcgctga
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