Agrococcus sp. Marseille-Q4369: JSQ78_00730
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Entry
JSQ78_00730 CDS
T09684
Name
(GenBank) PKD domain-containing protein
Organism
agro
Agrococcus sp. Marseille-Q4369
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
Laminin_G_3
PKD
K319L-like_PKD
Laminin_G_2
Laminin_G_1
DUF5122
Sde0182_C
Big_9
DUF4399
InlK_D3
Rax2
Bact_surface_Ig-like
DUF7382
Motif
Other DBs
NCBI-ProteinID:
QUW18942
LinkDB
All DBs
Position
116786..121339
Genome browser
AA seq
1517 aa
AA seq
DB search
MATPAAAGPRDTASPFARLAHAAIATVAAAALVMGLHVAPPPAAAAPVELSSAAPLAEVE
AAAVEQPVTSDPLPTVQIDGIVYAQAVAGNRVFAGGEFANARPAGAAPGTQQTPRSNLLA
YNLTTGALDGAFAPQVNGRIMAAAVSPDGSTLYIGGAFTAVNGQARYRLAAFNAATGALL
PNWRPGTNSTVFGLAVSGSAVYVAGQYTNISNTTRTGVAAVHPTTGALLPFNPVHTGGYL
ARAVVVSPDGAKVVAAGSFLTTNGSDNPGRGMAALDAQTGASLPWAVNSVLRNGGNNAAI
YSLASDATSVYGSGYDFGGNKQQDDFEGAFRASWADGTMVWMEDCHGDTYSVAPHNGILY
TATHTHYCGNIGEFPQLNPWYLNHSLAFGAEPSGRAITPDIWGYRSFTGNPAAKLLHWYP
IWGTGSVSGVDQAGWSVASAGDYLLYGGEFTSINGVRQQGLVRFTTRDTAPKKIGPTMQG
GTWPISTASFREGEARIGWQANYDADSAELKYEVFRQGVATPLTTMTESSTYWQRPQMRF
ADRTVQAGQTYSYRVRVTDPDGNSTQSDWTSVTIAQPGSTPAYSLDVLDDNPVHYWPMGE
PSGTTAVDWAGGSDLTLTASTTRGAAGQATDGSTRATTFAGTTSSYASTRALEPGSDELS
VEAWFRTTSTQGGKIVGFGSSATGDSSSHDRHIYLSGNGTITWGAYPGAVRVVQSGAGYN
DGQWHHVVGTLGPDGMTLYVDGARIGSRADTTSGQAYDGYWRVGGDNLASWPNVNSRYLN
GSIADVAVYDRALTRGEVDGHRVASGRASSFPTAPEDGYGAAVFDLDPTLYWRLGETGGT
VARDAGPDGLNGTYARAGTAQFQFGRAGAIADVADTAVGFTSSRNVLGTWSNRQIVVSAR
SMQSPTTFSVETWFSTTSTRGGKLVGFGNSSSVALNASSNYDRHVMMTPEGRLQFGVWSG
SAQVLETTGTYNDGAWHHVVAQQSPSGMQLYVDGQLVGSNAVTTADPYVGYWRLGGDTTW
VGDPFWVGTLDEFAVYGAPLSGDQVREHFELGSEGAANQAPTAAFTSRADGLTVDFDASA
SSDPEGPISSYAWDFGDGSHGSGETAQRVYVSPGTYTVTLTVTDARGVTAQIAHDVVVAG
PNAAPVAQFTASADGRTVSVDASASADPDGTIASYAWDFGGATGSGVTASHTYPSDGSRT
ITLTVTDDRGATASTSQQVTVEAANQPPVASFAVTADGLVAAVDGSASSDPDGSIASYTW
AFGDGGEGNGVTASHTYQASGERTITLTVVDDDGASASTTRTVTLEEEPPANILARDSFT
RSATASWGTPDAGPAWATFYGNQAFSVADGRGAIALAPSHTREARMSTLSQSSAEVELSF
SSDVASAGGTASVTVISRQVGTNVYSGRVRLEPNGVVRLYLLYNETLLGSAVLPQSYTPG
AVVHVRVLATGTSPTTLAASAWLDGAAEPAGWMVQATHSLAGMQTAGFVGIRAALSSAST
VPTQTLRFDDWTVLVPQ
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacaccagcagcagccggaccccgggacaccgcgtccccgttcgcgcgcctcgcg
cacgccgcgatcgcgacagtcgcggcggcggcgctcgtgatgggactccatgtcgccccg
cccccggcagctgctgcgccggtcgagctctcctcggcggcgccgctcgccgaggtggag
gcggcagcggtcgagcagccggtcacgtccgacccgctcccgaccgtgcagatcgacggg
atcgtctacgcgcaagcggtggccggcaatcgcgtcttcgccgggggcgagttcgccaac
gcgcggccggcgggcgccgcacccggcacgcagcagacgccgcggtcgaacctgctggcg
tacaacctcacgacgggcgccctcgacggtgccttcgcgccacaagtcaacggccgcatc
atggccgccgcggtctctcccgacggctcgaccctgtacatcggcggcgcgttcacggcc
gtgaacggtcaggcgcggtaccgcctcgcggcgttcaacgccgcgaccggcgcgctgctg
ccgaactggcggccgggcacgaactcgacggtgttcgggctcgccgtgagcggctcggcc
gtctacgtcgccggccagtacaccaacatcagcaacacgacgcgcacgggcgtcgcggcc
gtgcacccgacgacgggcgcgctgctgccgttcaatcccgtgcacaccggcggctacctc
gctcgagcggtcgtcgtctctcccgacggcgccaaggtggtcgctgccggatccttcctc
acgacgaacggctcggacaaccccgggcgagggatggcggcgctcgatgcgcagacgggc
gcgagcctcccgtgggcggtcaacagcgtgctccgcaacggcggcaacaacgccgcgatc
tactcgctggcatccgacgcgacgagcgtctacggctcgggctacgacttcggcggcaac
aagcagcaggacgacttcgagggcgcgttccgagccagctgggcggacggcacgatggtc
tggatggaggactgccacggcgacacctactcggtcgcgccgcacaacggcatcctctac
acggccacgcacacgcactactgcggcaacatcggagagttcccgcagctcaacccctgg
tacctcaaccactcgctcgcgttcggtgccgagccgagcggccgggcgatcacgcccgac
atctggggctaccgcagcttcaccggcaaccccgccgcgaagctgctccactggtacccg
atctggggcacgggctcggtctcgggcgtcgaccaggccggctggagcgtcgcctccgcg
ggcgactacctgctctacggcggcgagttcacctcgatcaacggcgtccgtcagcagggc
ctcgtgcgcttcaccacgcgcgacaccgcgcccaagaagatcgggccgacgatgcagggc
ggcacgtggccgatcagcaccgcgtcattccgagagggcgaggcgcgcatcggctggcag
gcgaactacgacgccgacagcgcggagctgaagtacgaggtcttccggcagggcgtcgcg
acaccgctcacgacgatgacggagtcgtcgacgtactggcagcgcccgcagatgcggttc
gccgaccggacggtgcaagcagggcagacctacagctaccgcgtgcgagtcaccgacccc
gatggcaactcgacgcagtccgactggacgagcgtgacgatcgcgcagcccggctcgact
cccgcgtactcgctcgacgtgctcgacgacaaccctgtgcactactggccgatgggtgag
ccgagcggcacgaccgcagtcgactgggcggggggttccgatctcacgctcacggcgagc
acgacgcgcggtgccgcgggccaggcgaccgacggctcgaccagggcgaccacgttcgcc
ggcacgacgagctcgtacgcgagcactcgcgctctcgagcccggatccgacgagctctcc
gtcgaagcgtggttccgcacgacgagcacgcagggcggcaagatcgtcgggttcggcagc
agcgcgacgggcgactcgagctcccacgaccggcacatctacctctcgggcaacggcacg
atcacatggggcgcctatccgggagccgtgcgcgtcgtgcagagcggcgccggctacaac
gacgggcagtggcaccacgtggtcggcacgctcgggcccgacggcatgacgctctacgtc
gatggcgctcgcatcggctcgcgggccgacacgacgtcgggccaggcgtacgacggctac
tggcgcgtgggaggcgacaacctcgcctcgtggccgaacgtcaactcgcgctacctcaac
ggcagcatcgccgatgtcgcggtctacgaccgggcgctcacgcgcggcgaggtcgacggc
caccgcgtcgcctccggccgggcctcgagcttcccgaccgcgcctgaggatggctacgga
gcagccgtgttcgacctcgatccgacgctgtactggcgcctgggcgagacaggcggcacg
gtggcgcgcgacgcgggccccgacggcctcaacggcacctacgcccgcgccgggaccgcg
cagttccagttcggtcgtgcgggcgcgatcgccgacgtcgcggacaccgctgtcggcttc
acctcgtcgaggaacgtcctcggcacatggagcaaccgccagatcgtcgtgagcgcccga
tcgatgcagagcccgaccacgttctcggtcgagacctggttcagcacgacctccacgcga
gggggcaagctcgtcggcttcgggaacagcagctcggtggcgctcaacgcctcgtcgaac
tacgaccggcacgtgatgatgacgccggagggccgtctgcagttcggcgtgtggagcggc
tcggcgcaagtgctcgagacgaccggcacctacaacgacggtgcgtggcaccacgtcgtg
gcgcagcaatcgccgagcggcatgcagctctacgtcgacggacagctcgtgggctccaac
gcggtcacgaccgccgacccctacgtcggctactggcggctcggcggcgacacgacgtgg
gtcggtgacccgttctgggtcggcacgctcgacgagttcgcggtctacggcgctccgctg
agcggcgaccaggtgcgcgagcacttcgagctcgggagcgagggcgccgccaaccaggcg
ccgacggcggcgttcaccagccgggcggacgggctcacggtcgacttcgacgcctcggcg
tcgagcgacccggaaggcccgatctcgtcgtacgcgtgggacttcggcgacggctcgcat
ggctccggcgagaccgcgcagcgcgtctacgtctcacctggcacgtacaccgtcaccctc
acggtcacggatgcgaggggcgtcacggcgcagatcgcccacgacgtcgtggtcgcgggg
ccgaacgccgcgccggtcgcccagttcaccgcatccgccgacggacgcacggtgagcgtc
gacgcgagtgcctctgcagacccggacggcacgatcgcgtcgtacgcgtgggacttcggc
ggggccaccgggagcggcgtcaccgcatcccacacgtacccgtccgacgggtcgcgcacg
atcacgctcacggtgacggatgaccgcggcgcgaccgcgagcacgagccagcaggtgacg
gtcgaggcggcgaaccagccgccggtcgcgtcgttcgcggtgacggccgacggcctcgtc
gccgcggtcgacggcagcgcctcgagcgacccggacgggtcgatcgcgtcctacacctgg
gcgttcggcgacggcggcgaggggaacggcgtgacggcgagccacacctaccaggcatcg
ggggagcgcacgatcaccctcacggtggtcgatgacgacggcgcgtccgcgtcgacgacc
cggacggtcacactcgaggaggagccgccggcgaacatcctcgcgcgcgacagcttcacg
cgctccgccacagcttcgtggggcacgcccgacgccggccccgcctgggcgaccttctac
ggcaaccaggccttctcggtcgcggacggacgcggcgccatcgcgctcgcgccctcgcac
actcgggaggcgcggatgagcacgctctcgcagtcgagcgccgaggtcgagctgtcgttc
tcgtcggatgtcgcctccgccggcgggaccgcgagcgtcaccgtcatctcgcggcaggtg
ggcacgaacgtctactcgggtcgcgtgcggctcgagccgaacggcgtcgtgcgcctctac
ctgctctacaacgagacgctgctgggcagcgccgtgctgccgcagtcgtacacgcccggg
gcagtggtccacgtgcgcgtgctcgcgacgggcacgtcgccgacgacgctcgcggcatcg
gcgtggctcgatggcgccgcggagcccgcgggctggatggtccaggcgacgcactcgctc
gcgggcatgcagaccgccggcttcgtcggcatccgcgccgcgctcagctccgcttcgacc
gtccccacgcagacgctccgcttcgatgactggacggtgctggtgccgcagtga
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