Agrococcus sp. Marseille-Q4369: JSQ78_00835
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Entry
JSQ78_00835 CDS
T09684
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JSQ78_00835 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_00835 (mutM)
Enzymes [BR:
agro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JSQ78_00835 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JSQ78_00835 (mutM)
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JSQ78_00835 (mutM)
BRITE hierarchy
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
TackOD1
Motif
Other DBs
NCBI-ProteinID:
QUW18960
LinkDB
All DBs
Position
147988..148869
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AA seq
293 aa
AA seq
DB search
MPELPEVEVVRAGLAPAVTGARVEGVEVLDARSIARHDGDAAAFEAALTGRTLGAPERRG
KFLWVPIRDRADALLAHLGMSGQVLVREPGTAPDRHTRIRLLLDQPDHGPIEIRFADQRI
FGGLAVRPLVAADGGRAVPDQAAHIALDPIDAGFDASAVARRLRRRRQGVKAALLDQTLV
SGIGNIYADEALWRSRLHYATPGERLTQARALALLADVRAVLEQALAEGGTSFDAQYVNV
NGQAGYFEHSLHAYGRGGQPCHRCGAIMVREPWANRSSTRCPRCQRRPRGIAV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtcgaggtcgtgcgcgctgggctcgcgccggccgtgaccggc
gctcgcgtcgagggcgtcgaggtgctcgacgcgcgatcgatcgcccgtcacgacggcgac
gccgccgccttcgaggcggccctcaccggtcgcaccctcggcgcaccggagcggcgcggc
aagttcctctgggtgccgatccgggacagggcggatgcgctgctcgcgcacctggggatg
tcgggccaggtgctcgtgcgcgagccaggcaccgcgcctgaccgccacacgcgcatccgg
ctgctgctcgaccagcccgaccacggcccgatcgagatccgcttcgcagaccagcgcatc
ttcggcggactcgccgtgcggcccctcgtcgcggccgacggcggccgggcggtgcccgac
caggccgcgcacatcgcgctcgatccgatcgacgccggcttcgacgcatctgccgtcgcc
cgccgcctgcgccggagaaggcagggcgtgaaggccgcgctgctcgaccagacgctcgtg
tcgggcatcggcaacatctacgccgacgaggcgctctggcggtcgcggctgcactacgca
acgccgggtgagcggctcacgcaagcgcgggcgctcgccctgctcgccgacgtgcgcgcc
gtgctcgagcaggcgctcgccgagggcggcacctcgttcgacgcgcagtacgtcaacgtc
aacgggcaggctggctacttcgagcactcgctgcacgcctacggccgcggcggtcagccg
tgccaccgctgcggcgcgatcatggtgcgcgagccgtgggccaaccgctcgtcgacgcgc
tgcccgcgctgccagcggcggcccaggggcatcgcggtctga
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