Agrococcus sp. Marseille-Q4369: JSQ78_00890
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Entry
JSQ78_00890 CDS
T09684
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JSQ78_00890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agro03000
]
JSQ78_00890
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_00890
Enzymes [BR:
agro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JSQ78_00890
Transcription factors [BR:
agro03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JSQ78_00890
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JSQ78_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
QUW18969
LinkDB
All DBs
Position
complement(161126..161962)
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AA seq
278 aa
AA seq
DB search
MTGAPGILAWLRPRAVPGVEVVEPDGYRRALPGPRVATATVEGDTASTADADLARVFDIH
GADARREADARLTWAAARHGLPALAEAVAASPALAQPGCADAHEMLVRAIVGQQISVVAA
TQQLALLAALGDALPAPLVADGVERCFPTMAQVADGADVLRGPAAKTAAVRRAAEAVATG
AIDVSPASDLEVVRAQLLELKGIGPWTVGYLSLRLGDPDVLLLGDVAVRKGARLLGIDDL
AGFAADCAGHRSALMLRCWAASAPAAPPAAQRFSAASR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggcgccgggcatcctcgcgtggctgcggccgcgcgcggtgcccggcgtcgag
gtcgtcgagcccgacggctaccggcgggcgctccccggtccgcgcgtcgcgaccgcgacg
gtcgagggcgacaccgcgtcgaccgccgacgcggacctggcgcgcgtcttcgacatccac
ggggcggatgcgcggcgcgaggcagacgcgcggctcacgtgggcggctgctcggcacggc
ttgcccgcgctcgccgaggcggtcgccgcgtcgccggcgctcgcccaaccgggctgcgcg
gacgcgcacgagatgctcgtgcgcgcgatcgtcgggcagcagatctccgtggtggcggcg
acgcagcagctcgcgctcctggccgcgctcggcgatgccctgcccgccccactcgttgcc
gacggggtcgagcggtgcttcccgacgatggcgcaagtcgcggacggcgccgacgtgctg
cgcggccccgccgcgaagaccgccgccgtgcgccgggccgcggaggcggtcgcgacgggc
gcgatcgacgtctcccccgcatccgacctcgaggtcgtgcgcgcgcagctcctcgagctc
aagggcatcggcccgtggacggtgggctacctctcgctgcggctcggcgaccccgacgtg
ctgctgctcggcgacgtcgcggtgcggaagggtgcgcggctactcggcatcgacgacctc
gccggcttcgccgcggactgcgcggggcatcgctcggccctcatgctgcggtgctgggcg
gcgtcggcgccagctgctcccccggccgcgcagcgcttcagcgccgcgtcgcggtga
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