Agrococcus sp. Marseille-Q4369: JSQ78_01400
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Entry
JSQ78_01400 CDS
T09684
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03030
DNA replication
agro03430
Mismatch repair
agro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JSQ78_01400 (holA)
03430 Mismatch repair
JSQ78_01400 (holA)
03440 Homologous recombination
JSQ78_01400 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agro03032
]
JSQ78_01400 (holA)
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_01400 (holA)
Enzymes [BR:
agro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JSQ78_01400 (holA)
DNA replication proteins [BR:
agro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JSQ78_01400 (holA)
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JSQ78_01400 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QUW19056
LinkDB
All DBs
Position
257299..258297
Genome browser
AA seq
332 aa
AA seq
DB search
MAASVPKIAIPKITWEQVSPAPVVLVFGKESFLADRAMQRLRALLLMEDPELEIHDVDAG
QYIDGALELIASPSLFDEPRLVRVENGVKATDALIADVLRYLASPVDGTTLVIRHDGSTV
RGKKMLDAIRKTPGAIEVVCQPLGRSELVPFVRGELRLLEREATPGAIAALVDAFHSDIA
ELANAVRQVALDTQGDVTEQVVRTYYSGRVETTAFAVVDAVIAGDVATALVTLRHAIATG
ADPVPIVAAFAMRFRQLAKVSGAGGGDSQAARQLGMQDWQVRNARKDLRGYSDATLCDAI
EAIAHADHAVKGAERDPHYAVERLVRQLAARA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgagcgtccccaagatcgccatcccgaagatcacgtgggagcaggtgtctccc
gcgccggtcgtgctcgtgttcggcaaggagtcgttcctcgccgatcgcgcgatgcagcgg
ctgcgcgcgctcctgctcatggaggatcccgagctcgagatccacgacgtcgacgccggc
cagtacatcgacggcgcgctcgagctcatcgcgagcccctcgctgttcgacgagccgcgg
ctcgtgcgcgtcgagaacggcgtgaaggcgaccgacgccctcatcgccgacgtgctgcgc
tacctcgcctcgcccgtcgacggcacgaccctcgtcatccgccacgacggctccaccgtg
cgcggcaagaagatgctcgacgcgatccgcaagacgcccggcgcgatcgaggtggtctgc
cagccgctggggcgctccgagctcgtgccgttcgtgcgcggcgagctgcgattgctcgag
cgggaggcgacgccgggcgcgatcgcggcactcgtggatgcgttccactccgacatcgcc
gagctcgcgaacgcggtgcgccaagtcgcgctcgacacgcagggcgacgtgaccgagcag
gtcgtgcgcacctactactcgggccgcgtcgagacgacggcgttcgccgtcgtcgacgcc
gtgatcgcgggcgacgtcgccaccgcgctcgtcacgctccggcacgcgatcgcgaccggt
gccgatcccgtgccgatcgtcgcggcgttcgcgatgcgcttccggcagctcgcgaaggtc
tcgggcgcgggcggcggcgactcgcaggccgcgcggcagctcggcatgcaggactggcag
gtgcggaacgcccgcaaggatctgcgcggctactccgacgcgacgctgtgcgacgcgatc
gaggcgatcgcccacgccgaccacgccgtgaagggcgccgagcgcgacccgcactacgcc
gtcgagcggctcgtgcggcagctcgccgcgcgcgcctga
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