Agrococcus sp. Marseille-Q4369: JSQ78_02365
Help
Entry
JSQ78_02365 CDS
T09684
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03030
DNA replication
agro03410
Base excision repair
agro03420
Nucleotide excision repair
agro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JSQ78_02365 (polA)
03410 Base excision repair
JSQ78_02365 (polA)
03420 Nucleotide excision repair
JSQ78_02365 (polA)
03440 Homologous recombination
JSQ78_02365 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agro03032
]
JSQ78_02365 (polA)
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_02365 (polA)
Enzymes [BR:
agro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JSQ78_02365 (polA)
DNA replication proteins [BR:
agro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JSQ78_02365 (polA)
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JSQ78_02365 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JSQ78_02365 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DUF5069
Motif
Other DBs
NCBI-ProteinID:
QUW20031
LinkDB
All DBs
Position
450569..453190
Genome browser
AA seq
873 aa
AA seq
DB search
MVIDGHSLAFRAFFALPLENFVNSEGQHTNAIHGFLSMLLKLLQDHRPTHLAVAFDISRF
SFRTREYAEYKGTRDETPKEFKGQVPLLEEALHAMGVRTLSKEDYEADDILATLSVQGAK
AGMDVYVVSGDRDTIQLVNDDVTLLYPSVRGVSELKRYTPETVRERYGIEPAQYPEIAAL
VGESSDNLIGIDKVGEKTAVKWITQYGTVENLLAHADEIKGVVGNNLREQRERAERNRRL
NQLLTDVDLGVEIDELARGQVDEAKLREVFQRLQFRTLLDRVLKQEGSGDSAAPLEPDVQ
APAVQKLVDEELDLWLSRAKGTVAVSIAPDGAGGIAGFGVATEGASAYVPFKAGTADYDG
FVEWLASDAPKALHDVKASIKVLERAGLRLGGAAHDTRVAAWLQTPTAPPKTFELDWQTE
ALLGATLPAPDPNQLVPEVEPEQLGTVAWLTGELSRAQRPRLDPGTLGVLDDIELPLMPV
LVRMERQGVRMDRDVLQRILDEMRAKAAGHAEAAYAEIGHEVNLGSPKQLQTVLFEELDM
PKTRATKTGYSTDAQALADLQETNPHPFLGLLLQHRETSKLAQIIEGLLRAIQDDGRIRT
RYDQTGSASGRLSSNDPNLQNIPVRTEVSREIRSAFAHGPEFETMLTADYSQIEMRIMAH
LSGDEGLIEAFLSGEDLHRFVGSRIFGVDPSEVTALQRVKVKAMSYGLAYGLSAFGLSKQ
LRISQAEAKQLMLDYFQRFGGIRDYLRGVVMQAKDDGYTTTIFGRRRPFPDLTSSNRVLR
ENAERQALNSPIQGSAADIIKRAMIAIDRRIADEGLGSRMLLQVHDELVFEVATGEREAL
EAIVRAEMGGAAELSVPLEVQVGVGPNWDAAAH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgacggccactccctcgcgttccgggcgttcttcgccctgccgctcgagaac
ttcgtcaacagcgaagggcagcacacgaacgccatccacggcttcctgtcgatgctgctc
aagctgctgcaggaccaccggcccacccacctcgcggtcgcgttcgacatctcccggttc
tcgttccgcacccgcgagtacgccgagtacaagggcacgcgcgacgagacgccgaaggag
ttcaagggccaggtgccgctgctcgaggaggcgctccacgcgatgggcgtgcgcaccctc
tcgaaggaggactacgaggccgacgacatcctcgcgaccctctcggtgcagggcgcgaag
gccggcatggacgtctacgtcgtctcgggcgaccgcgacacgatccagctcgtcaacgac
gacgtgacgctgctctacccctcggtgcgcggcgtctccgagctcaagcgctacacgccc
gagacggtgcgcgagcgctacggcatcgagccggcgcagtaccccgagatcgccgcgctc
gtcggcgagtcgagcgacaacctcatcggcatcgacaaggtcggcgagaagaccgccgtc
aagtggatcacgcagtacggcacggtcgagaacctgctcgcgcacgccgacgagatcaag
ggcgtcgtcggcaacaacctgcgcgagcagcgcgagcgcgccgagcgcaaccgccgcctc
aaccagctgctcaccgacgtcgacctcggcgtcgagatcgacgagctcgcgcgcgggcag
gtcgacgaggcgaagctgcgcgaggtgttccagcggctgcagttccgcacgctgctcgac
cgcgtgctcaagcaggagggcagcggcgactcggccgccccgctcgagcccgacgtgcag
gcgcccgcggtgcagaagctcgtcgacgaggagctcgacctgtggctctcgcgcgcgaag
ggcacggtcgccgtctcgatcgcgcccgacggcgccggcggcatcgcgggcttcggcgtc
gcgaccgagggcgcgagcgcctacgtgccgttcaaggccggcacggccgactacgacgga
ttcgtcgagtggctcgcgtcggacgccccgaaggcgctccacgacgtcaaggcgtccatc
aaggtcctcgagcgcgcggggctccgcctcggcggggcagcgcacgacacgcgcgtcgcc
gcgtggctgcagacgcccaccgcgccgcccaagaccttcgagctcgactggcagaccgag
gcgctgctcggcgcgacactcccggcgcccgaccccaaccagctcgtgcccgaggtcgag
cccgagcagctcggcaccgtcgcgtggctcacgggcgagctctcgcgcgcgcagcgaccg
cgcctcgaccccggcacgctcggcgtgctcgacgacatcgagctgccgctcatgccggtg
ctcgtgcgcatggagcgccagggcgtgcgcatggatcgcgacgtgctgcagcgcatcctc
gacgagatgcgggcgaaggccgcggggcacgccgaggccgcgtacgccgagatcggccac
gaggtcaacctcggcagccccaagcagctgcagacggtgctgttcgaagagctcgacatg
ccgaagacgcgcgcgacgaagacgggctactcgaccgacgcgcaagcgctcgccgacctg
caggagacgaacccgcacccgttcctcgggctgctgctgcagcaccgcgagacgtcgaag
ctcgcgcagatcatcgaggggctgctgcgcgcgatccaggacgacggccgcatccgcacc
cgctacgaccagaccggctcggcctccggccgcctctcgtcgaacgacccgaacctgcag
aacatcccggtgcgcacggaggtgagccgcgagatccgctcggcgttcgcgcacgggccc
gagttcgagacgatgctcaccgccgactactcgcagatcgagatgcgcatcatggcgcac
ctctcgggcgacgagggactcatcgaggcgttcctctcgggcgaggacctgcaccgcttc
gtcggcagccgcatcttcggcgtcgacccgagcgaggtcacggcgctgcagcgcgtcaag
gtcaaggcgatgagctacggcctcgcgtacgggctgagcgccttcgggctctcgaagcag
ctgcgcatctcgcaagccgaggcgaagcagctcatgctcgactacttccagcgcttcggc
ggcatccgcgactacctccgcggcgtcgtgatgcaggcgaaggacgacggctacacgacc
acgatcttcggccgccgccgcccgttccccgacctgacgtcgtcgaaccgcgtgttgcgc
gagaacgccgagcggcaggcgctcaactcgcccatccagggctcggccgccgacatcatc
aagcgcgcgatgatcgcgatcgaccgccgcatcgccgacgaggggctcggctcgcgcatg
ctgctgcaggtgcacgacgagctcgtcttcgaggtcgcgaccggcgagcgcgaggcgctc
gaggcgatcgtccgcgccgagatgggcggcgcggccgagctctcggtgccgctcgaggtg
caggtcggcgtcggcccgaactgggacgccgccgcgcactga
DBGET
integrated database retrieval system
