Agrococcus sp. Marseille-Q4369: JSQ78_04545
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Entry
JSQ78_04545 CDS
T09684
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JSQ78_04545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agro03019
]
JSQ78_04545
03016 Transfer RNA biogenesis [BR:
agro03016
]
JSQ78_04545
Enzymes [BR:
agro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JSQ78_04545
Messenger RNA biogenesis [BR:
agro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JSQ78_04545
Transfer RNA biogenesis [BR:
agro03016
]
Prokaryotic type
tRNA degradation factors
JSQ78_04545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_1st
DUF6074
Motif
Other DBs
NCBI-ProteinID:
QUW19575
LinkDB
All DBs
Position
complement(888764..891055)
Genome browser
AA seq
763 aa
AA seq
DB search
MEGPEITFAEAVIDNGRFGTRTVRFETGRLAQQAQGSAVAYIDEETMLLSATSVSKHPKD
SFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVEGIRNEVQ
VVITVLAIEPDELYDVLAINAASMSTQLSGLPFDGPIGGVRVALIDGQWVAFPKHSQLEQ
AVFNMVVAGRVVTAADGSEDVAIMMVEAEATDNAWNLIEGGAQKPTEEVVAEGLEASKPF
IKQLVAAQEQVAKTAAKETQQYPLFPPYSDEAFAAVHELAAERLGEVYRIADKLERQSAD
DQLKEQVKQQINERIERGELEAVIATQVSGAYKAVTKEVVRGRILTDGIRIDGRGPADIR
PLDAEVAVVPRVHGSAIFQRGETQIMGITTLNMLKLEQQIDSLSPVTSKRYMHNYNFPPY
STGETGRVGSPKRREIGHGALAERAIVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCA
STLALLNAGVPLKAPVAGIAMGLVTDEVDGETRYAALTDILGAEDALGDMDFKVAGTPDF
ITAIQLDTKLSGIPASVLAGALTQAKEARTKILEVLNAAIDAPDEMAPTAPRVISVQIPV
DKIGELIGPKGKTINQIQDDTGAQISIEDTGVVYIGAVDGPSAEAARAAVNAIANPLNPE
LGERYLGTVVKTASFGAFVSLLPGRDGLLHVTAMRALNGGKRIENVDDVVSIGQKIQVEI
TKIDDRGKLSLEIVDDSEPVAPVAAKSDDADSSVSSVSSVSAE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcctgagatcacattcgccgaggccgtcatcgacaacggccgcttcggcacc
cgcaccgtccgcttcgagaccggccgcctcgcgcagcaggcgcagggctcggccgtcgcg
tacatcgacgaggagacgatgctgctgagcgccacgagcgtctcgaagcaccccaaggac
tcgttcgacttcttcccgctcacggtggacgtcgaggagcgcatgtacgccgcgggccgc
atccccggctcgttcttccgccgcgagggccgtccgtcgaccgacgcgatcctcacgtgc
cgtctcatcgaccggccgctgcgcccctcgttcgtcgagggcatccgcaacgaggtccag
gtcgtcatcacggtgctcgcgatcgagcccgacgagctctacgacgtgctcgccatcaat
gccgcgtccatgtcgacgcagctctcgggcctgcccttcgacggcccgatcggcggcgtg
cgcgtcgcgctcatcgacggccagtgggtcgcgttcccgaagcactcgcagctcgagcag
gccgtgttcaacatggtcgtcgcgggccgcgtcgtcaccgctgccgacggcagcgaggac
gtcgcgatcatgatggtcgaggcagaggcgaccgacaacgcctggaacctcatcgagggc
ggcgcgcagaagccgaccgaggaggtcgtcgccgagggcctcgaggcctcgaagcccttc
atcaagcagctcgtcgccgcgcaggagcaggtcgcgaagaccgccgcgaaggagacgcag
cagtacccgctgttcccgccgtactcggacgaggccttcgcggccgtccacgagctcgcg
gcagagcgcctcggcgaggtctaccgcatcgccgacaagctcgagcgccagtcggccgac
gaccagctcaaggagcaggtcaagcagcagatcaacgagcgcatcgagcgcggcgagctc
gaagccgtcatcgcgacgcaggtctcgggcgcctacaaggcggtcacgaaggaggtcgtc
cgcgggcgcatcctgaccgacggcatccgcatcgacggtcgcggccccgccgacatccgc
ccgctcgacgccgaggtcgcggtggtgccgcgcgtgcacggctccgcgatcttccagcgc
ggcgagacgcagatcatgggcatcacgacgctcaacatgctcaagctcgagcagcagatc
gactcgctgagccccgtgacgagcaagcgctacatgcacaactacaacttcccgccgtac
tcgacgggcgagacgggccgcgtcggcagcccgaagcgccgcgagatcggccacggcgcg
ctcgccgagcgggcgatcgtgcccgtgctgccgagccgcgaggagttcccctacgcgatc
cgccaggtctcggaggcgctcggctcgaacggctcgacgtcgatgggctcggtgtgcgcc
tcgacgctcgcgctgctcaacgccggcgtgccgctcaaggcgcccgtcgcgggcatcgcg
atgggcctcgtgaccgacgaggtcgacggtgagacccgctacgcggcgctcaccgacatc
ctcggcgccgaggacgcgctcggcgacatggacttcaaggtcgcaggcacgcccgacttc
atcacggccatccagctcgacacgaagctctcgggcatccccgcctcggtgctggctggc
gcgctcacgcaggcgaaggaggcgcgcacgaagatcctcgaggtcctgaacgccgccatc
gacgctcccgacgagatggcgccgactgcgcctcgcgtcatcagcgtgcagatcccggtc
gacaagatcggcgagctcatcggccccaagggcaagacgatcaaccagatccaggacgac
acgggcgcccagatctcgatcgaggacacgggcgtcgtctacatcggcgccgtcgacggt
ccctcggcggaggccgcgcgcgccgcggtcaacgcgatcgccaacccgctcaaccccgag
ctcggcgagcgctacctcggcacggtcgtcaagaccgcgtcgttcggcgccttcgtctcg
ctgctgccgggccgcgacggcctgctgcacgtgaccgccatgcgcgcgctcaacggcggc
aagcgcatcgagaacgtcgacgacgtggtctcgatcggtcagaagatccaggtggagatc
accaagatcgacgaccgcggcaagctctcgctcgagatcgtcgacgactcggagcccgtg
gccccggtcgcggcgaagagcgacgatgccgactcgtccgtctcctcggtgtcctcggtc
tcggccgagtag
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