Agrococcus sp. Marseille-Q4369: JSQ78_04995
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Entry
JSQ78_04995 CDS
T09684
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro00300
Lysine biosynthesis
agro00470
D-Amino acid metabolism
agro01100
Metabolic pathways
agro01110
Biosynthesis of secondary metabolites
agro01120
Microbial metabolism in diverse environments
agro01230
Biosynthesis of amino acids
Module
agro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JSQ78_04995 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JSQ78_04995 (lysA)
Enzymes [BR:
agro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JSQ78_04995 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QUW19655
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Position
complement(987998..989461)
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AA seq
487 aa
AA seq
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MPHPLAPHLTDAGDPNALAEGVWPASAERVDGALRVGGVDLGAIAAQHGTPFLLVDETEV
RARARRIREAFEAAFSPEAGGAGVDVYYAGKALLTGDVARWMRGEGLRIDVCTGGELAIA
LRAGVEPALIGSHGNNKSLAEIEAGVTAGIGTFVIDSAIEVERIAAAAERAGRVQRVRLR
ISVGVHASTHEFLATSHEDQKFGIPIDEAPAIVARIRELPSLELAGLHTHIGSQIFDHSG
FAESARRMLALHAALGEGAPLPELNLGGGFGIAYTAADSPEPIEAIASRLADAVRTTAGE
LGIPVPRIAIEPGRWIVGPAGVTVYSVGTVKPVRLADGARTYVAVDGGMSDNARPALYDA
QYSARLANRVSVAEPTLVRVAGHHCESGDIVVDAEWLPTDVEPGDLLAVAATGAYCHSLA
SNYNATPRPPVLAVTDGAVRVLVRRESIDDVLSRDEGLHPSAPLAASPPAGTEAPRPDDD
TTGAASA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcatccgctcgccccgcacctcaccgacgcgggcgaccccaacgccctcgccgag
ggcgtctggcccgcgtcggccgagcgcgtcgacggcgcgctccgcgtcggcggcgtcgac
ctgggcgcgatcgcggcgcagcacggcacccccttcctgctcgtcgacgagaccgaggtg
cgcgcccgggcgcgacgcatccgcgaggccttcgaagccgcgttctcgcccgaggccggc
ggcgcgggcgtcgacgtctactacgccggcaaggcgctcctcaccggcgacgtcgcccgc
tggatgcggggcgagggcctccgcatcgacgtgtgcacgggcggcgagctcgcgatcgcg
ttgcgcgccggcgtcgagcccgccctcatcggctcgcacggcaacaacaagtcgctcgcc
gagatcgaggcgggcgtcaccgccggcatcggcaccttcgtcatcgactcggccatcgag
gtcgagcgcatcgccgccgccgccgagcgagcgggccgcgtgcagcgcgtgcggctgcgg
atctcggtcggcgtgcacgcctcgacccacgagttcctcgcgacgagccacgaggaccag
aagttcggcatcccgatcgacgaggcgcctgcgatcgtcgcgcgcatccgcgagctgccg
agcctcgagctcgcgggcctccacacacacatcggctcgcagatcttcgaccactcgggc
ttcgccgagtcggcgcgccgcatgctcgcgctccacgctgcgctgggcgagggcgcaccg
ctccccgagctcaacctcggcggcggcttcggcatcgcctacaccgccgccgacagcccc
gagccgatcgaggccatcgcgtcgaggctcgcggatgcggtgcgcacgaccgcgggcgag
ctcggcatccccgtgcccaggatcgcgatcgagccgggccgctggatcgtcggccccgcc
ggcgtcaccgtctactcggtcggcaccgtgaagcccgtgcggctcgcggacggcgcccgc
acctacgtcgccgtcgacggcggcatgagcgacaacgcgcgccccgcgctctacgacgcg
cagtactctgcgcggctcgcgaaccgggtctccgtcgccgagccgacgctcgtgcgcgtc
gcgggccaccactgcgagtcaggtgacatcgtcgtcgacgccgagtggctgcccaccgac
gtcgagcccggcgacctgctcgccgtcgccgcgaccggcgcctactgccactcgctcgcc
tcgaactacaacgcgacgccccgcccgcccgtgctcgccgtcaccgacggcgccgtccgc
gtgctcgtgcgccgcgagtcgatcgacgacgtgctctcgcgcgacgagggactgcacccg
tcggcgccgctggccgcctccccgcccgccggcaccgaagccccgcgacccgacgacgac
accaccggagccgcatccgcatga
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