Agrococcus sp. Marseille-Q4369: JSQ78_05290
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Entry
JSQ78_05290 CDS
T09684
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03030
DNA replication
agro03430
Mismatch repair
agro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JSQ78_05290
03430 Mismatch repair
JSQ78_05290
03440 Homologous recombination
JSQ78_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agro03032
]
JSQ78_05290
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_05290
Enzymes [BR:
agro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JSQ78_05290
DNA replication proteins [BR:
agro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JSQ78_05290
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JSQ78_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QUW19706
LinkDB
All DBs
Position
1047434..1048072
Genome browser
AA seq
212 aa
AA seq
DB search
MALDFTAIDFETANGSAASACAVGLVKVRDGLIVDRFSTLIQPSFPHDEFWEWNTRIHGI
HAHQVLDAPDWAEAQRLILEFGGDDVYVAHNAGFDKGVMRAAAKAARLPVPDMRWTDSLR
IARKTFALESYRLPVAALAAGFDDFRHHDAGGDAEACAAIVIGAAKRHELDDLDALVKRC
MSAVHEIGERHEELAELEAARRAAQRERPWWQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgacttcacggcaatcgacttcgagaccgccaacggcagcgcggcctccgcg
tgcgcggtcggcctcgtgaaggtgcgggacggcctcatcgtcgaccgcttctcgacgctc
atccagccctccttcccgcacgatgagttctgggagtggaacacgcgcatccacggcatc
cacgcccaccaggtgctggatgcgcccgattgggccgaggcgcagcggctcatcctcgag
ttcggcggcgacgacgtctacgtcgcccacaacgccggcttcgacaagggcgtcatgcgc
gcggcagcgaaggccgcgcggctgccggtgcccgacatgcgctggaccgactcgctgcgc
atcgcccgcaagaccttcgcgctcgagtcgtaccggctgccggtcgcggcgctcgcggcg
ggcttcgacgacttccgccaccacgacgcgggcggcgatgccgaggcgtgcgcggcgatc
gtgatcggcgccgcgaagcggcacgagctcgacgatctcgacgcgctcgtcaagcgctgc
atgtcggccgtgcacgagatcggtgagcgccacgaggagctcgccgagctcgaggcggca
cggcgcgcggcgcagcgcgagcggccgtggtggcagtag
DBGET
integrated database retrieval system
