Agrococcus sp. Marseille-Q4369: JSQ78_05400
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Entry
JSQ78_05400 CDS
T09684
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JSQ78_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_05400
Enzymes [BR:
agro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JSQ78_05400
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JSQ78_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Peptidase_S66
UPF0242
THF_DHG_CYH
DUF2203
Motif
Other DBs
NCBI-ProteinID:
QUW19721
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All DBs
Position
1067541..1068764
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AA seq
407 aa
AA seq
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MAERITGTPDEPWSVDRLGAELKSYIGRLGHLWVEGEITQWSASRGNVFGKLKDVLGDST
VAFNVWSSTLARIEGDFGQGDRVVLLVKPDYWPRAGTLSMITQQIRHVGLGDLLARLEAL
RRSLAAEGLFDASRKRPLPFLPGRIGLITGRDSDAEKDVLRNAQLRWPGVEFRVEHAAVQ
GDATVPTVLAALERLEADPEVDVIIIARGGGDFQNLLGFSDERLVRAVAAATTPVVSAIG
HEADRPLLDDVADLRASTPTDAAKRVVPDVAEELARIAQARAQLRQRVTQHVAREAERLE
AVRSRPALARPESIVDAREEDLARLTARSDELAARLVDVAHQRLDYLKQTLRALSPQATL
DRGYAVVQTRAGSVVRDAAALAAGDGLLVTLARGTVDAEVLAAHAEA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggatcacgggcacgccggacgagccgtggagcgtcgaccggctcggcgcg
gagctgaagtcgtacatcggccggctcggccacctgtgggtcgagggcgagatcacgcag
tggtcggcctcgcgcggcaacgtcttcggcaagctcaaggacgtcttgggcgactcgacc
gtcgcgttcaacgtctggagctcgacgctcgcgcgcatcgagggcgacttcggccagggc
gaccgcgtcgtgctgctcgtcaagcccgactactggccgcgcgccggcacgctctcgatg
atcacgcagcagatccgccacgtcgggctcggcgacctgctcgcgcggctcgaggcgctg
cgccgctcgctcgccgccgaggggctcttcgacgcctcgcggaagcgcccgctcccgttc
ctgccggggcgcatcggcctcatcacgggccgggactccgacgccgagaaggacgtgctg
cggaacgcccagctgcgctggccgggtgtcgagttccgcgtggagcacgccgcggtgcag
ggcgatgcgacggtgccgaccgtgctcgcggcgctcgagcggctcgaggccgaccccgag
gtcgacgtcatcatcatcgcccgcggcggcggcgacttccagaacctgctcggcttcagc
gacgagcggctcgtgcgcgcggtcgcggcggcgacgacgccggtcgtctcggcgatcggg
cacgaggccgaccggccgctgctcgacgacgtggccgatctgcgggcctcgacgccgacg
gatgcggcgaagcgggtcgtgccggatgtcgcggaggagctcgcccgcatcgcgcaggcg
cgggcgcagctgcggcagcgcgtcacccagcacgtcgctcgcgaggcggagcggctcgag
gccgtccgctcgcgcccggcgctcgcgcgccccgagtcgatcgtcgacgcgcgcgaggag
gacctcgcgcggctcacggcgcgctcggatgagctcgccgcgcgcctcgtcgacgtcgcc
caccagcggctcgactacctcaagcagacgctcagggcgctcagcccgcaggcgacgctc
gatcgcggctacgcggtcgtgcagacgcgggcgggctcggtcgtccgcgacgcggcagcg
ctcgcggccggcgacggcctgctcgtgacgctcgcgcgcggcaccgtcgacgccgaggtg
ctggccgcccacgccgaggcgtag
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