Agrococcus sp. Marseille-Q4369: JSQ78_06345
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Entry
JSQ78_06345 CDS
T09684
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro00190
Oxidative phosphorylation
agro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JSQ78_06345
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JSQ78_06345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agro03019
]
JSQ78_06345
Enzymes [BR:
agro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JSQ78_06345
Messenger RNA biogenesis [BR:
agro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JSQ78_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QUW19893
LinkDB
All DBs
Position
1258504..1260762
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AA seq
752 aa
AA seq
DB search
MTDGTATSAPASSETLRERPARTLGEERSFHDANEADFDDYDDESSWSAELQGTATEDGL
PADRFLDRELSWLAFNERVLEMGEDPRVPLLERANFLAIFASNLDEFFMVRVAGLKRRIA
TGLAVPTNVGRSPQELLHAVVQRAHELQLRHALAARESFQVDLSEAGIHVVTWHDLTDEE
REAMSARFEAEIFPVLMPLAVDPAHPFPYISGLSLNLAVRVQVPGEEEPQFARLKVPAVL
PRFIELPRAADGAQRFLPLEALIANNLDEVFSGMGIIDHHVFRVTRNEDVSIDEDDTENL
ISALEEELSRRKFGPPIRLEVAEDIDADTLDLLVDELGITEHEVYRLPGLLDLTGLFQIA
GIDRPDLRYTKRVPVTATPFLPGDQDEKPDLFAAITRKDVLVHHPYESFATSVQALLEQA
ADDPDVLAIKQTLYRTSGDSPVVAALIRAAAAGKQVLALVEVKARFDEQANIRWAKQLER
AGVHVVYGIVGLKTHCKLMLIVRREQGRLRHYCHIGTGNYNPKTSRIYEDFGLFTDNDQV
GRDITRLFNELSGYAKEKSYQRLLVAPRHLRKGLLDRIERETQAARAGRKARIRFKINAI
VDEQLIDALYRASRAGVEVQIWVRGICSIKPGVPGLSENITVRSIVGRYLEHSRVFAFWN
DGAEEVFIGSADMMHRNLDRRVEALIQLTSTEHMRDISQHFDRAMSPQTASWWAEPDGTW
TRRFYDDEGAPLDDLHRDRMIQIQRRKRAGGR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggcaccgccaccagcgctcccgcgagctcggagacgctccgcgagcgcccg
gctcgcactctcggcgaggagcgcagcttccacgacgccaacgaggccgacttcgacgac
tacgacgacgagtcgagctggtcggccgagctgcagggcaccgcgaccgaggacggcctg
cccgccgaccgcttcctcgaccgcgagctctcctggctcgccttcaacgagcgcgtgctc
gagatgggcgaggacccgcgcgtgccgctgctcgagcgcgccaacttcctcgcgatcttc
gcctcgaacctcgacgagttcttcatggtgcgggtcgcgggcctcaagcgccgcatcgcg
acggggctcgccgtgccgacgaacgtgggccgctcgccgcaggagctgctgcacgccgtc
gtgcagcgcgcgcacgaactgcagctgcggcacgcgctcgcggcgcgcgagtcgttccag
gtcgacctaagcgaggctggcatccacgtcgtcacgtggcacgacctcaccgacgaggag
cgcgaggcgatgtcggcgcgcttcgaggccgagatcttccccgtcctgatgccgctcgcg
gtcgaccccgcgcatccgttcccctacatctccggcctctcgctcaacctcgccgtgcgc
gtgcaggtgccgggcgaggaggagccgcagttcgcgcgcctcaaggtgccggcggtgctg
ccgcgcttcatcgagctcccccgcgcggccgacggcgcgcagcggttcctgccgctcgag
gcgctcatcgcgaacaacctcgacgaggtgttctccgggatgggcatcatcgaccaccac
gtcttccgcgtcacgcgcaacgaggacgtctcgatcgacgaggacgacaccgagaacctc
atcagcgcgctcgaggaggagctgtcgcggcgcaagttcgggccgcccatccggctcgag
gtcgcggaggacatcgacgccgacacgctcgacctgctcgtcgacgagctcggcatcacc
gagcacgaggtctaccggctgccggggctgctcgacctcaccgggctcttccagatcgcg
ggcatcgaccggcccgacctgcgctacacgaagcgcgtgccggtcaccgcgacgccgttc
ctgcccggcgaccaggacgagaagcccgacctcttcgcggcgatcacgcgcaaggacgtg
ctcgtgcaccacccgtacgagtcgttcgcgacgagcgtgcaggcgctgctcgagcaagcg
gccgacgaccccgacgtgctcgcgatcaagcagacgctctaccgcacctcgggcgactcg
cccgtcgtcgcggcgctcatccgcgcggccgcggccggcaagcaagtgctggcgctcgtg
gaggtgaaggcccgcttcgacgagcaggcgaacatccgctgggcgaagcagctcgagcgc
gcgggcgtgcacgtcgtctacggcatcgtcggcctcaagacgcactgcaagctcatgctc
atcgtgcgccgcgagcaggggcggctgcgccactactgccacatcggcaccggcaactac
aacccgaagacgagccgcatctacgaggacttcgggctcttcaccgacaacgaccaagtg
ggtcgcgacatcacgaggctcttcaacgagctctccggctacgcgaaggagaagtcgtac
cagcggctgctcgtcgccccgcgccacttgcggaaggggctgctcgaccgcatcgagcgc
gagacgcaggccgccagggccggccggaaggcgcgcatccgcttcaagatcaacgcgatc
gtcgacgagcagctcatcgacgcgctctaccgcgcgagccgcgcgggcgtcgaggtgcag
atctgggtgcgcggcatctgctcgatcaagccgggcgtgccggggctgagcgagaacatc
acggtgcgctcgatcgtcggccgctacctcgagcactcgcgcgtgttcgcgttctggaac
gacggcgccgaggaggtcttcatcggctcggccgacatgatgcaccgcaacctcgaccgc
cgcgtcgaggcgctcatccagctcacctcgaccgagcacatgcgcgacatctcgcagcac
ttcgatcgcgcgatgtcgccgcagacggcgtcgtggtgggcggagcccgacggcacctgg
acgcgccgcttctacgacgacgagggcgcgccgctcgacgacctgcaccgcgaccggatg
atccagatccagcgccgcaagcgcgcgggcggccggtga
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