Agrococcus sp. Marseille-Q4369: JSQ78_10220
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Entry
JSQ78_10220 CDS
T09684
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_10220
Enzymes [BR:
agro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JSQ78_10220
DNA repair and recombination proteins [BR:
agro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JSQ78_10220
Prokaryotic type
JSQ78_10220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QUW18199
LinkDB
All DBs
Position
2036047..2037396
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AA seq
449 aa
AA seq
DB search
MAAQLVWFRRDLRVRDHPALVAAAAAGEVLPVFVADPAFAGAGAPRTAALRTALRALHEA
TDGALVVRSGRPEEVIPALVREAGADAVHVSGESTPYGRRRDARVEAALDVPLVATGSPY
AVTPGRVRKGDGSPFRVFTPFSRAWLERGWRAPAERPSPRWVRRVEGEPLPEPPETSAGL
SWASEEGARERWATFLDGPIDDYDAARDRPDLDGTSRLSIALKLGTVHPRTLLADLDAVA
PRRSRAAQRSLKRFQAELAWREFYADVLLHHPRSAWRDLGAQLRGIAYDEPGQLFEAWCA
GRTGFPFVDAGMRQLLAEGWMHNRVRMVTASFLTKDLHVWWPYGARFFLEHLADGDLASN
SHGWQWTAGTGTDAAPYFRVFNPVLQGQRYDPDGDYVRRWVPELRHIPGAAVHEPWKVPV
GLAHGYPQRILDHAVERREALDRLAAVSA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcccagctcgtctggttccgccgcgacctgcgcgtgcgcgaccaccccgcgctc
gtcgccgcggccgccgcgggcgaggtgctgcccgtgttcgtcgccgacccggcgttcgcg
ggcgccggcgcaccgcgcaccgccgcgctccgcacggcgctccgcgcgctgcacgaggcg
accgacggcgcgctcgtggtgcgatccgggcggcccgaggaggtcatccccgcgctcgtg
cgcgaggcaggggcggatgcggtgcacgtttcgggcgagtcgaccccgtacgggcggcgg
cgcgacgcgcgcgtcgaggcggcgctcgacgtgccgctcgtcgcgaccggatcgccctac
gccgtgacgccgggccgcgtgcggaagggcgatggctcgccgttccgcgtgttcaccccc
ttctcgagggcgtggctcgagcgcggctggcgtgcgcccgccgagcggccgagcccgcgc
tgggtgcggcgcgtcgagggggagccgctgcccgagccgcccgagacgagcgccgggctc
tcgtgggcgagcgaggagggcgcgcgcgagcgctgggcgacgttcctcgacgggccgatc
gacgactacgacgccgcgcgcgaccggcccgacctcgacgggacgtcgcggctctcgatc
gcgctcaagctcggcaccgtgcacccgcgcacgctgctcgccgacctcgacgcggtcgcg
ccgcgccgcagcagggcggcccagcgctccctcaagcgcttccaggccgagctcgcctgg
cgcgagttctacgccgacgtgctgctccaccacccgcgctccgcctggcgcgacctcggc
gcgcagctgcgcggcatcgcctacgacgagccgggccagctgttcgaggcgtggtgcgcg
gggcgcacgggcttcccgttcgtcgacgccggcatgcggcagctgctcgccgagggatgg
atgcacaaccgggtgcggatggtgaccgcgagcttcctgacgaaggacctgcacgtgtgg
tggccctacggcgcgcgcttcttcctcgagcacctcgccgacggcgacctcgcctcgaac
agccacggctggcagtggacggccggcaccggcaccgatgcggcgccctacttccgggtc
ttcaaccccgtgctgcagggccagcgctacgacccggacggcgactacgtgcgccgctgg
gtgccggagctgcgccacatccccggcgccgcggtgcacgagccgtggaaggtgcccgtc
ggcctcgcgcacggctacccgcagcgcatcctcgaccacgccgtcgagcggcgcgaggcg
ctcgaccggctcgcggccgtctcggcgtga
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