Agrococcus sp. Marseille-Q4369: JSQ78_12410
Help
Entry
JSQ78_12410 CDS
T09684
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
agro
Agrococcus sp. Marseille-Q4369
Pathway
agro00521
Streptomycin biosynthesis
agro00523
Polyketide sugar unit biosynthesis
agro00525
Acarbose and validamycin biosynthesis
agro00541
Biosynthesis of various nucleotide sugars
agro01100
Metabolic pathways
agro01110
Biosynthesis of secondary metabolites
agro01250
Biosynthesis of nucleotide sugars
Module
agro_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JSQ78_12410 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JSQ78_12410 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JSQ78_12410 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JSQ78_12410 (rfbB)
00525 Acarbose and validamycin biosynthesis
JSQ78_12410 (rfbB)
Enzymes [BR:
agro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JSQ78_12410 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
adh_short
NmrA
KR
SrpI-like
NAD_binding_8
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
QUW18581
LinkDB
All DBs
Position
2475994..2476992
Genome browser
AA seq
332 aa
AA seq
DB search
MSKLLVTGGAGFIGSNFVHHVIANSDHDVVVLDKLTYAGDRATLEGLPEDRVRFVVGDIA
DTEVVDPLVAETDAVVHFAAESHNDNSLSDPSPFVHTNLIGTFTLLEAARKHGTRFHHIS
TDEVYGDLELDDPAKFTPETPYNPSSPYSSTKAGSDLLVRAWVRSFGLEATISNCSNNYG
PRQHVEKFIPRQITNVIDGVRPRLYGAGENVRDWIHADDHSSAVLRILERGRIGETYLIG
ADGERNNLEVVQAILRLMGQEADAFDHVKDRAGHDLRYAIDATKLRDELGWEPAYTDFEA
GLAATIEWYREHESWWRPQKAAAEAKYAAAGH
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagctcctcgtgaccggcggcgccggcttcatcggctcgaacttcgtgcaccac
gtcatcgccaacagcgaccacgacgtcgtcgtgctcgacaagctcacctacgcgggtgac
cgggcgacgctcgaggggctgcccgaggaccgcgtgcggttcgtcgtcggcgacatcgcc
gacaccgaggtcgtcgacccgctcgtcgccgagacggacgcggtcgtgcacttcgcggcc
gagtcgcacaacgacaactcgctctccgacccgtcgccgttcgtgcacacgaacctcatc
ggcacgttcacgctgctcgaggcggcacgcaagcacggcacgcgcttccaccacatctcg
accgacgaggtctacggcgacctcgagctcgacgaccccgcgaagttcacgcccgagacg
ccctacaacccctcgagcccctactcgtcgacgaaggcgggctccgacctgctcgtgcgc
gcgtgggtgcgctcgttcggcctcgaggcgacgatctcgaactgctcgaacaactacggc
ccgcgccagcacgtcgagaagttcatcccgcggcagatcaccaacgtcatcgacggcgtg
cggccgcgcctctacggcgcgggcgagaacgtgcgcgactggatccacgccgacgaccac
tcgagcgcggtgctgcgcatcctcgagcgcggccgcatcggcgagacctacctcatcggt
gccgacggcgagcgcaacaacctcgaggtcgtgcaggcgatcctgcgcctcatgggccag
gaggcggatgcgttcgaccacgtgaaggaccgcgcgggccacgacctgcggtacgcgatc
gacgcgacgaagctgcgcgacgagctcggctgggagccggcgtacaccgacttcgaggcg
gggctcgccgcgacgatcgagtggtaccgcgagcacgagtcgtggtggcgcccgcagaag
gccgccgccgaggcgaagtacgccgcggcaggccactga
DBGET
integrated database retrieval system