KEGG   Agrococcus sp. Marseille-Q4369: JSQ78_12410
Entry
JSQ78_12410       CDS       T09684                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
agro  Agrococcus sp. Marseille-Q4369
Pathway
agro00521  Streptomycin biosynthesis
agro00523  Polyketide sugar unit biosynthesis
agro00525  Acarbose and validamycin biosynthesis
agro00541  Biosynthesis of various nucleotide sugars
agro01100  Metabolic pathways
agro01110  Biosynthesis of secondary metabolites
agro01250  Biosynthesis of nucleotide sugars
Module
agro_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:agro00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    JSQ78_12410 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JSQ78_12410 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JSQ78_12410 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JSQ78_12410 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JSQ78_12410 (rfbB)
Enzymes [BR:agro01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JSQ78_12410 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 NAD_binding_10 Sacchrp_dh_NADP adh_short NmrA KR SrpI-like NAD_binding_8 Isoamylase_C
Other DBs
NCBI-ProteinID: QUW18581
LinkDB
Position
2475994..2476992
AA seq 332 aa
MSKLLVTGGAGFIGSNFVHHVIANSDHDVVVLDKLTYAGDRATLEGLPEDRVRFVVGDIA
DTEVVDPLVAETDAVVHFAAESHNDNSLSDPSPFVHTNLIGTFTLLEAARKHGTRFHHIS
TDEVYGDLELDDPAKFTPETPYNPSSPYSSTKAGSDLLVRAWVRSFGLEATISNCSNNYG
PRQHVEKFIPRQITNVIDGVRPRLYGAGENVRDWIHADDHSSAVLRILERGRIGETYLIG
ADGERNNLEVVQAILRLMGQEADAFDHVKDRAGHDLRYAIDATKLRDELGWEPAYTDFEA
GLAATIEWYREHESWWRPQKAAAEAKYAAAGH
NT seq 999 nt   +upstreamnt  +downstreamnt
atgagcaagctcctcgtgaccggcggcgccggcttcatcggctcgaacttcgtgcaccac
gtcatcgccaacagcgaccacgacgtcgtcgtgctcgacaagctcacctacgcgggtgac
cgggcgacgctcgaggggctgcccgaggaccgcgtgcggttcgtcgtcggcgacatcgcc
gacaccgaggtcgtcgacccgctcgtcgccgagacggacgcggtcgtgcacttcgcggcc
gagtcgcacaacgacaactcgctctccgacccgtcgccgttcgtgcacacgaacctcatc
ggcacgttcacgctgctcgaggcggcacgcaagcacggcacgcgcttccaccacatctcg
accgacgaggtctacggcgacctcgagctcgacgaccccgcgaagttcacgcccgagacg
ccctacaacccctcgagcccctactcgtcgacgaaggcgggctccgacctgctcgtgcgc
gcgtgggtgcgctcgttcggcctcgaggcgacgatctcgaactgctcgaacaactacggc
ccgcgccagcacgtcgagaagttcatcccgcggcagatcaccaacgtcatcgacggcgtg
cggccgcgcctctacggcgcgggcgagaacgtgcgcgactggatccacgccgacgaccac
tcgagcgcggtgctgcgcatcctcgagcgcggccgcatcggcgagacctacctcatcggt
gccgacggcgagcgcaacaacctcgaggtcgtgcaggcgatcctgcgcctcatgggccag
gaggcggatgcgttcgaccacgtgaaggaccgcgcgggccacgacctgcggtacgcgatc
gacgcgacgaagctgcgcgacgagctcggctgggagccggcgtacaccgacttcgaggcg
gggctcgccgcgacgatcgagtggtaccgcgagcacgagtcgtggtggcgcccgcagaag
gccgccgccgaggcgaagtacgccgcggcaggccactga

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