Agrococcus sp. Marseille-Q4369: JSQ78_13500
Help
Entry
JSQ78_13500 CDS
T09684
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
agro
Agrococcus sp. Marseille-Q4369
Brite
KEGG Orthology (KO) [BR:
agro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agro03400
]
JSQ78_13500
DNA repair and recombination proteins [BR:
agro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JSQ78_13500
Archaeal homologous recombinant proteins
JSQ78_13500
BRITE hierarchy
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
Dynactin_p22
AAA_21
nSTAND3
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QUW18772
LinkDB
All DBs
Position
complement(2684976..2687960)
Genome browser
AA seq
994 aa
AA seq
DB search
MRLLRLELAGFGPYRGRFEIDFASFEADGVYLIAGPTGAGKSTILDAVCFALYGSAPRYD
ERAHLRSDLAGPDEATWVELDVQLGGRLLRVRRSPEHERPKQRGSGTTREKARATLLERT
PSGWDAIATTAKEVGHEVARLVGLTKDEFLQVTLLAQGGFAEFLGASSDERKALLERLFG
TGSMRRLRELALADAKAVGARRAELEQRRDDRVARVRALIGPADDDGGAAAASALDGGAA
DERSLAALEDVLTERLRDAAAAAMAAAEAEREARAARDAARALADRVARRDGALAALAAL
RAAEDAVAADRERLADADRAADAAAEVDRWTRAALEAATAVLPEALEPERAAVEREREAA
LDDVARASETSRFERELPQLERAAADAERDARTAEEAVEAARRERAGQPEARDALVRARE
DASTRAAGAEPARAAVEAAEARLEARDRADRLREREREASAAAGRTAAAQHAAADALQRL
QAARVAGMAGELAGALVAGEPCPVCGAIEHPSPHAPGGDIVTADDVADALAASEAALAAA
SAANEALAAVERERASLEAVAGIADRVALAAALEAARDAQRACLDAAAERERLGGEIEQH
DDRSRELDARIAELDRVVGERRAAAASAATRLADALARVREALGGHPDGRSMLQSASTRR
DALEQWLEADAERARAGAEQAEAAAEGRAALERLGLPDREALAAMRLEPAERLELRERIR
AHDDELASARGVLAQPELQGLPESADDVAPLDAALAEAEAASALAARAEATAQTRLDHAA
TDLDDAREAIRSLADGAEHAATVRALADALDGRNELRQDIETYVLAARLGTIIEAANLRL
GAMTEGRFALLHDEGTAYRGKASGLGIQVLDAHTGRARTTKSLSGGETFLASLALALGLA
DVVQAEAGGISLETLFVDEGFGSLDQDSLEAALSTLDGLRAGGRSVGVISHVQQMQERIP
WRIRVVPVPGGGSRIEVAGSDSPDRTQGAALRAG
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctcctgcggctcgagctcgcgggcttcggcccctaccgcgggcgcttcgagatc
gacttcgcctcgttcgaggccgacggcgtctacctcatcgcggggccgacgggcgcgggc
aagtcgaccatcctcgacgcggtgtgcttcgccctctacggctccgctccccgctacgac
gagcgggcgcacctccgcagcgacctcgccggccccgacgaggcgacgtgggtcgagctc
gacgtgcagctcggcggccggctgctgcgcgtgcgccgctcgcccgagcacgagcgcccg
aagcagcgaggcagcggcacgacgcgcgagaaggcccgagcgacgctgctcgagcgcacg
ccgtcgggctgggacgcgatcgcgacgaccgcgaaggaggtcgggcacgaggtcgcgcgc
ctcgtggggctcacgaaggacgagttcctgcaggtgacgctcctcgcgcaaggcggcttc
gccgagttcctcggcgcctcgagcgacgagcgcaaggcactgctcgagcggctcttcggc
acgggcagcatgcggcggctccgcgagctcgcgctcgccgacgcgaaggccgtcggcgct
cggcgcgcagagctcgagcagcggcgggacgaccgggtggcgcgcgtccgcgcgctcatc
ggcccggccgacgacgacggtggcgcggcggccgcgagcgcgctcgacggcggggccgcc
gacgagcgttccctcgccgcgctcgaggacgtcctgacggagcggctccgcgacgccgct
gcggcagcgatggccgccgcggaggcggagcgcgaagcgcgcgccgcgcgcgacgccgcc
cgcgcgctcgccgatcgcgtcgcgcgccgcgacggtgcgctcgccgccctcgccgcgctc
cgggcggcggaggacgccgtcgcggcggatcgcgagcggctcgccgacgccgatcgcgcc
gccgacgccgcggccgaggtcgaccgctggacgcgcgctgcgctcgaggcggcgaccgcg
gtgctgcccgaggccctcgagcccgagcgcgcagcggtcgagcgcgagcgcgaggccgcg
ctcgacgatgtcgcccgcgcgagcgagacgtcgcgcttcgagcgcgagctgccccagctc
gagcgggccgccgcggatgccgagcgcgacgcgcgcaccgccgaggaggcggtcgaggcg
gcgaggcgcgagcgcgccgggcagcccgaggcgcgcgacgcgctcgtgcgggcgagggag
gacgcctcgacgcgcgccgcgggcgccgagccggcgcgcgccgccgtcgaggcggccgag
gctcggctcgaggcccgcgaccgcgccgatcggctgcgcgagcgcgagcgcgaggcgtcg
gcggcggccggccgcaccgcggccgcccagcacgccgctgccgacgcgctccagcgcctc
caggcggcgcgcgtcgccgggatggcgggagagctcgccggcgcgctcgtcgccggtgag
ccgtgccccgtgtgcggcgcgatcgagcacccgagcccgcacgcgccgggcggcgacatc
gtcaccgccgacgacgtcgccgacgcgctcgcggcgagcgaagctgccctcgcggccgcc
tcggcggcgaacgaggcgctcgccgcagtcgagcgcgagcgtgcgtcgctcgaggcggtc
gccggcatcgcggatcgcgttgcgctcgccgcggccctcgaggcggcgcgcgacgcgcag
cgcgcgtgcctcgacgccgccgccgagcgggagcggctcggcggcgagatcgagcagcac
gacgatcgctcgcgcgagctcgacgcgcgcatcgccgagctcgatcgcgtggtcggcgag
cggcgcgccgccgccgcctcggccgcgacccgactcgccgacgcgctcgcgagggtccgg
gaggcgctcggcggccaccccgacgggcggtcgatgctgcagtccgcctcgacgcgccgc
gacgcgctcgagcagtggctcgaggccgacgccgagcgcgcgcgggccggagccgagcag
gccgaggccgccgccgaagggcgcgccgcgctcgagcgactcggcctgcccgaccgcgag
gcgctcgcggccatgcggctcgagcccgccgagcggctcgagctccgcgagcgcatccga
gcgcacgacgacgagctcgcgagtgcgcgcggcgtgctcgcgcagcccgagctgcagggg
ctgcccgagtcggccgacgacgtcgcgccgctcgatgccgcgctcgccgaggccgaggcg
gcgtccgccctcgccgctcgcgcggaggcgacggcccagacccggctcgatcacgccgcg
accgacctcgacgacgcgcgggaggccatccgctcgctcgccgacggcgccgagcacgcc
gcgaccgtgcgcgccctcgccgacgcgctcgacggccgcaacgaactgcggcaggacatc
gagacctacgtgctcgccgcgcggctcggcacgatcatcgaggcggcgaacctgcggctc
ggcgcgatgaccgaggggcgcttcgcgctcctgcacgacgagggcaccgcctatcgcggc
aaggcgagcggcctcggcatccaggtgctcgacgcgcacaccgggcgggcgcgcacgacg
aagtcgctctcgggcggcgagacgttcctcgcgtcgctcgcgctcgcgctcggcctcgcc
gacgtcgtgcaggccgaggcgggcggcatctcgctcgagacgctcttcgtcgacgagggg
ttcggctcgctcgaccaggactcgctcgaggcggcgctctcgacgctcgacgggctgcgc
gcgggcggccgcagcgtcggcgtcatcagccacgtgcagcagatgcaggagcgcatcccg
tggcgcatccgcgtcgtgcccgtgccgggcggcggcagccgcatcgaggtggccgggagc
gactcccccgaccgcacccagggggccgcgctccgcgctgggtag
DBGET
integrated database retrieval system