Apium graveolens (celery): 141659941
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Entry
141659941 CDS
T11340
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
agrv Apium graveolens (celery)
Pathway
agrv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141659941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agrv03009
]
141659941
Ribosome biogenesis [BR:
agrv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
141659941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_14
AAA_5
AAA_16
TIP49
NPHP3_N
Nucleolin_bd
AAA_22
AAA_2
RNA_helicase
AAA_17
AAA_33
nSTAND3
AAA_28
NACHT
Rad17
ABC_tran
AAA_18
NB-ARC
IstB_IS21
Mg_chelatase
TsaE
Viral_helicase1
AAA_11
nSTAND_NTPase5
AAA_3
ATPase_2
Parvo_NS1
NTPase_1
AAA_29
PduV-EutP
CCDC24
Motif
Other DBs
NCBI-GeneID:
141659941
NCBI-ProteinID:
XP_074322984
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All DBs
Position
5:28185317..28190806
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AA seq
730 aa
AA seq
DB search
MRRSGRSRNSSSRNTKRTRSRLSVEIEELYKKKNMLDVDEIVDHLRSNFHDYKRQKLQPF
TQCVGQILSHIVSKSESVDSGCDDDDLDNGDDAFELCQDKKRLKRGDQRNYSSAVTDSDG
DEEQEDNVASVQLLDVMKNSEEEDMKIIHGPRLSDFGGMDEVVKDLKRKVVLPMIRPELD
EWLGEWPISGILLHGPPGCGKTTLAHAIANEAGVPFYCTGAKELDSGVLGEGSIRELFSK
AYRTAPSIVFIDEIDTIASKRDNLNRETDRRTVTQLLLCMEKQSHRVVPQHEDVGSKDYA
CRRGHVLVIGATNRPDALDPALRRSGRFDLEIVLGVPDESARVKILSKLTNKLRVKCDYD
LVKLARCTPGFVGADLVGLVKEALNLAKKRIICQKESELSIEPLNEEYTAVWLKNPWSPA
EMEKLYITMGDFEEAAKMVQASTKRKGFSKIPSVKWEDVGGLESLRKNFERSIIRPIKNP
EYYQKLGRRSGKGFLLHGPPGCGKTLIAKAVAGEAGANFIYIKGAELLSKYVGESELAVR
ELFSRARICSPCIIFFDEVDALTTKRGTEGGEGGGVMARIVNQLLLELDGAEERPGVYVI
GATNRRDVIDPAFLRSGRLDTQIFVPPPSADERGLILKALAKNRPIDATVDLVALGKHDS
CNKLTGADLAALMEEAEDLALDDKDWDSRISDGTPLIIEAKHLERALKYIRKTRFTDVGH
KAARNAFSPA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtctggacgaagcagaaacagtagcagcagaaatacgaaacgtactcgaagt
cgcctgagcgtcgagattgaagagttatacaagaaaaagaatatgcttgatgtggatgag
attgtggatcatctcagatcaaattttcatgactataaacgccagaaacttcaacccttc
actcaatgtgttggccaaattttatctcatattgtttctaaatccgagtctgtggattca
ggttgtgatgatgatgatcttgataatggtgatgatgcatttgagctgtgtcaggataag
aagaggttgaagaggggtgatcagaggaattattcgtctgctgttactgattcggatgga
gacgaagaacaagaagataatgtagcatccgtgcagctgctagacgtaatgaaaaatagc
gaggaggaggatatgaaaataattcatggaccgaggttgagtgattttggtggaatggat
gaagtggtgaaggacttgaagaggaaggtggttcttccgatgatacgtccagaattggat
gaatggcttggagagtggccaatatctggaattttattacatggtccaccagggtgtggg
aagactacgcttgctcatgctattgcaaatgaggcaggggttccgttttattgtactggc
gccaaggaattggactctggtgtattaggtgaagggagtatccgggagttgttctcgaaa
gcttacaggactgcaccatccattgtttttattgatgaaattgataccattgcctctaaa
agggataatctaaatagggaaacagatcgccgtactgtgacacaactgctgttatgtatg
gaaaaacaatcacatagagtggtaccacaacatgaggatgtcggttcaaaagattatgct
tgcagacgtggccacgttttggtgattggtgccacaaataggcctgatgctcttgatcct
gcattaaggaggtcaggacgctttgatcttgagattgtactaggtgtaccagatgaaagt
gcaagggtgaagatcctttcaaagctcacgaataagcttagagttaaatgtgattatgat
ctcgtaaaactagctaggtgcactccagggtttgtcggagctgatctggttggactggtt
aaagaagctctcaatcttgccaagaagagaattatatgtcaaaaagagtcggaattgtca
atagaacctttaaatgaagaatatactgcagtatggttgaaaaacccatggtcccctgca
gagatggagaagctttacatcactatgggtgattttgaggaagcggctaagatggttcaa
gcttctaccaaaagaaagggattcagtaaaattcccagtgtgaaatgggaagatgttgga
gggcttgaatcgttgcggaagaattttgaacgatctataattaggccaataaaaaatcca
gaatattaccagaaacttggaaggcgctctggaaaaggatttttgttacacgggcctccg
ggttgtggtaaaactctaatagctaaggctgttgctggtgaagcaggagcaaattttata
tacataaagggagctgaactcttgagtaaatatgttggtgaaagtgagttggctgtccga
gaattattctctcgtgcaaggatatgttctccctgcataattttctttgatgaggtggac
gctttgacaacaaagcgaggaacagaagggggagaaggtggaggggtcatggcacgcatt
gtgaatcagttactgctagagctggatggtgcagaagagcgacctggtgtgtacgttatt
ggcgccacaaacaggcgtgatgtgatagatcctgcttttttgcggtcaggaagattggat
acacaaatttttgtccctccaccaagtgcagatgagagagggttaatattaaaagctcta
gctaagaacagaccaattgatgccacagtagacttggttgctttggggaagcatgattct
tgcaataagttgactggagctgacctcgctgcactgatggaggaagctgaagaccttgca
cttgatgacaaagattgggattcaagaatttcagatggcacgcctttgattatagaagca
aaacatctggagcgggcactaaaatatatccggaaaactagatttacagatgttggacac
aaggccgctcggaacgccttcagcccggcctaa
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