Apium graveolens (celery): 141661476
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Entry
141661476 CDS
T11340
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
agrv Apium graveolens (celery)
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrv03400
]
141661476
DNA repair and recombination proteins [BR:
agrv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
141661476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
CARF-assoc_HTH
PH_FT_C
AAA_13
ABC_tran
AAA_27
AAA
Motif
Other DBs
NCBI-GeneID:
141661476
NCBI-ProteinID:
XP_074324596
LinkDB
All DBs
Position
1:complement(18031856..18052389)
Genome browser
AA seq
1051 aa
AA seq
DB search
MDERSAKRAKINRGDDDYMPGNIVDIEIRNFMTFDKLKCQPASRLNLVVGPNGSGKSSLV
CAIALGLGGEPQLLGRASTIGAFVKRGEESGHIKITLKGSKNDEKITIMRKIDVHNKSEW
LYNGVGVPKKDVGEIVKKFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPRLP
VQHRALINKSHELQNLERAVRQNRETLDQLKSLNAEQERDVERVRQRQELIEKVNNMKKK
LPWLKYDMKKAEYIEAKEKEKDAKKKFDELAKAMNELQGPIEYHRKEKTVHDAKLRKLRA
ILDGNSKKRLQLAERENILSAQVRGKYKEMEGLKRQEQSRQERISKAKEDLAVSESELAN
LPHYEPPKDKLDSLGTQILEWEARADNIRSQKRDKEKAISQTKIILARCIDRLRNMEDSK
NKSLHALRTTGAERIFEAYKWVNDHRHEFNKDVYGPVLIEVNVKDRIHANYLEGHVAHYI
WKAFITQDSADRDFLVQNLMSFDVVVINHVDEGPNKEPFQVSQEQMHAIGIYSRLDRVFD
APPAVKDVLIGQFGLEYSYIGSKETDERANEVQRLGILDLWTPENHYRWSKSRYGDHVSA
VVESVNQSRLLLCNVDVDELESLRTKKKELEDAISDLETSLKVLQSEQRQNEDEAAKLQR
EREDILSIAQQEKKRRRELESRVHQRRSKVKSLETEENMDTILANLISSASDLNVQRFQC
AIEIKNLLIETLAYRRSSAEENMTVIELESKIRELEVGVKEQEKIALQASQQFEYCKNEV
EKFRLQLQAAKKHAESVSTISPDLEKLFIEMPSTIEELDAAILDTMNEANSILLLNHNIL
EEYENRQRKIDSLEGKQDAVEVELRRCVDEINALKESWLPTIRNLVAQINETFSRNFKDM
AVAGEVSLDERDIDYENYGILIKVKFREAGQLQVLSAHHQSGGERSVSTILYLVSLQDLT
NCPFRVVDEINQGMDPVNERKMFQQLVRASSQPNTPQCFLLTPKLLSDLEYSEACSVINV
MNGPWIEQSSKAWSAGGTWTSIVHSLTESRC
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacgctccgctaaacgcgccaaaatcaacaggggagatgatgattatatgcca
ggaaatattgttgatattgaaatccgtaactttatgacatttgataaactgaaatgccaa
ccggcatctcgcttaaaccttgttgttggacccaatgggtctggaaagagttctttagtg
tgtgccattgcgcttggtcttggtggtgagccgcagcttcttgggagggcttcgacaatt
ggagcttttgtcaagcgtggagaagaatctggacatattaagattactttgaaagggagt
aagaatgatgagaaaattactataatgcgtaaaattgatgtacacaacaagtccgagtgg
ttgtataatggtgttggtgtaccaaaaaaagatgttggtgaaatagttaaaaagttcaac
attcaagtaaacaatttaactcagtttttgccacaagacagggtctgcgagtttgctaag
ttgactcctgttcaacttctagaagagactgaaaaggctgttggtgacccaagactacct
gtacaacatcgtgctcttattaacaaaagtcatgagctgcaaaaccttgaacgagcagtt
aggcaaaatcgagaaactttggatcagctaaaatcacttaatgctgagcaggaaagagat
gttgagcgcgttcgtcaaaggcaagaactaatagaaaaggtcaataatatgaagaagaaa
ttgccctggctgaagtatgacatgaagaaggctgagtacatagaagccaaagaaaaggag
aaagatgcaaagaaaaagtttgacgagcttgctaaagctatgaatgaactacaaggacca
atagagtaccacaggaaagagaaaactgtccatgatgctaaattgaggaaattaagagct
atcttagacggcaattctaagaaacggttgcaactggcagaacgggaaaacattttgagt
gcacaagtgcggggaaaatataaggaaatggaaggactgaaaaggcaggaacaatctcgt
caggaaagaatctctaaagcgaaagaagatctggctgtgtcagagtcagaacttgcgaac
ctgccccattatgaaccacctaaggataaacttgatagcttaggtactcagattttggag
tgggaagctcgagcagataatataagatctcagaaaagggacaaggagaaagccatatct
cagactaagataattttggcccgatgtattgacaggttgaggaatatggaggattcaaag
aataaaagtttacatgccttgcgtactacgggcgctgaaagaatatttgaagcatataaa
tgggtgaatgatcaccgccatgagttcaataaagatgtgtatggtcctgtgttgattgag
gttaacgtcaaagatagaatccatgcaaactacttggaaggtcatgttgctcactatatc
tggaaggcctttataactcaggattctgctgatcgggacttcttggttcaaaatcttatg
tcttttgatgtcgtggttattaatcatgttgatgaaggtcctaacaaagagccctttcaa
gtttctcaggagcagatgcatgctattggtatatattccagacttgatcgagtttttgat
gctcctcctgcggtcaaagatgttctgataggacagtttgggctggagtattcctacatc
ggctccaaggaaactgatgagagagctaatgaggttcagagactgggtatcctggatttg
tggacccctgaaaaccactataggtggtccaaatctagatatggcgatcatgtttcagca
gttgttgaatcggtgaaccagtcacgtcttcttttatgcaatgtagatgttgatgagctt
gaaagtcttaggacaaagaaaaaggaactagaagatgcaatttctgatcttgaaactagt
ttgaaagtgcttcagagtgagcaaaggcaaaatgaagatgaagcagctaaactgcagagg
gaacgtgaagacattcttagcattgctcaacaagagaaaaagagaagacgtgaacttgaa
agtcgtgtccatcaaagaagatcaaaagtaaaatcattagaaacagaagaaaacatggac
actattctggcaaatctcataagttctgcttcagacttaaatgttcagcgatttcagtgt
gcaattgagatcaagaatttgctaattgaaacattggcttatagaagatcttctgctgaa
gaaaatatgacagtcattgaactcgagtctaagattagagaactagaagttggtgttaag
gagcaagagaagattgctttacaagcatctcaacaatttgagtactgtaaaaatgaggtg
gagaaatttcggctacaattgcaagcggccaagaagcatgccgaatcagtttccacgatt
tctccggatcttgaaaagctttttattgagatgccgtctacaattgaggaattggatgct
gctattcttgacaccatgaatgaagccaattccatacttcttcttaatcacaacattttg
gaagaatatgaaaaccgccagagaaaaatagattcccttgaaggcaaacaggatgcagtt
gaagtagaactgcgtagatgcgtagatgaaattaatgctttaaaggaaagctggcttcca
acaataagaaaccttgttgctcaaataaatgaaacatttagtcgtaactttaaagatatg
gctgttgctggagaagtttcattagatgagcgggacatagactatgagaattacgggata
cttataaaagtgaaattcagggaagctggacaacttcaggttttaagtgcccatcatcaa
tccggaggggagcgttctgtttcgactattctctaccttgtttctttacaagacctcaca
aactgcccttttcgagttgtcgatgagatcaaccaaggaatggatcctgtaaacgaaaga
aagatgtttcagcagttggttagagcttctagccaaccaaatacaccacagtgtttcttg
cttacaccaaagctactgtcagatctggaatacagcgaggcatgcagcgtcataaatgta
atgaatggaccatggatagagcagtcttcgaaagcatggagtgctggaggaacctggaca
tctattgtgcattcattgacagaaagtcggtgctga
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