Apium graveolens (celery): 141663850
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Entry
141663850 CDS
T11340
Name
(RefSeq) uncharacterized protein LOC141663850 isoform X1
KO
K24155
rabconnectin-3a
Organism
agrv Apium graveolens (celery)
Pathway
agrv04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
agrv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
141663850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
agrv04131
]
141663850
Membrane trafficking [BR:
agrv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
141663850
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
141663850
RAVE complex
141663850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_EML
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
ACS_CODH_B_C
Motif
Other DBs
NCBI-GeneID:
141663850
NCBI-ProteinID:
XP_074325788
LinkDB
All DBs
Position
6:complement(6597580..6616031)
Genome browser
AA seq
2521 aa
AA seq
DB search
MKQQQQDLLGDEKLPLKLIKSDAIPPCPSGSESCIDWLPDFSGYSWLAYASSSLLVISHL
PIATCSIPAPGGPIFRQVFELGGGVVSAVSWSPVIPSPGVLAASLDSSIRLFEFTASFSW
RQTTSLIQSTKVDAIGWTASGDGIISVGIQVLLWRRNYNPTSWEISWKLTPNRPQNLVSA
TWSIQGYFATALRCGNLAQSSSLPMHTASKIVIVYHSDPISQFVQAELPHPLPVLMIQWR
PSLIKQEARHQRRLILLTCCMDGTVRLWCEIDDARVRKVGKDSNDQRARRLLFCVCSVIE
INQPMNGILGSDIHVRWTTELNCIFNPSKEAASHCFPLDDYQPDGVGKCEWVIGFGPHRM
VTLWAIHCLDDVTPMRYPRVTLWKRRELEGHDPETSSLLLRKVVISRNQAFGPPTLCNLV
QLSSCNSLAWFQISFQTLTSSEEPSVRSQTKKVQSPCAHRKLNLDGHSGKILQVAIHSHK
YDLKFGASLDMNGLLLLWSISNISNSIMGLPTLNPTWKLSGKVALNECSPRYTTLDWLPA
VIDENLILLAGHSEGIDCFVVEFSKEEEENLFSYKLCTIPFTSCSCTEGPASVCAVPLPS
TCDEIFDSGTTMLLAVWKHTFTALSWKLSIHQCEFSGIHECTLDTRNISESNAQTFKENI
SGKRYCIIVDPWSSIFPELHNHSQVTTYDAVSPITVPLFGEQKECSANELLGSYAAYHLA
TGYSDGRVRLWRSKPLYIDSQWELVSVLDTHQSPIVALSVSDCGRKIATISPSSLSNSST
TIHIWEAVYLSFAGSFILEDSVVLDRKVVALSWLTLDNGQFLLAVCLQNQFMVYGQRLCG
GHNLLQSVRPSNRKIWFCVALSHTHPEIQYFFWGPNASAVVVHSEYFSLFSPWLLLVNNK
LHANCLSKESKHNSQDCIAAEKYLLTSVFTDSGTCDLKESSAEEKRNHYQLRSSYMINIP
NDTLSSIYAESYDLDLKIGFVNILNVAEKFGGSLPLYHPESLLMNICSGNWKRAQVVVQN
LVDYYTSRSVSSQICSLAKSGHDTPFVQLSDYLNGSLSSSSSNKAFQWRGDAMSITPSFQ
LQHDLSHSATSWEFNDSNASLISPSTRSDLVGFPEPIERLYDLGVLSIIEKVQMHAIIDL
LQEVSNSSSAYGSLDKSGRRFWVAIRFQHLYFVRKFSRMPTEGELVVNTSVIGWAFHSDC
QENLFDSLLPNESSWHEMRDIGVGYWYTNSTQLRLKMEKLARHQYLKAKDPKACALLYIA
LNRLQVLAGLFRLSKDEKDKPLVGFLSRNFKEDNNKAAALKNAYVLMGKHQLELAVAFFI
LGGDAASAINVCAKNLGDEQLALVISRLVEGYGGPLQCQLMSKFLLPSALEKGDIWLASF
LEWALGNYSQAIVRILGSPTSTVGDKPALVSYQDFFFDPSIGEYCLMLATSNSMKNALGE
RNAANLGRWAILMTATALSRCGLPLEGLERLSSSYSISGGSEQGNVSEVADFELLSEMLN
PSFCDPSSNWILVDVARQIESQAKSDMAMHYLIKLLKEHPSWADTNIEYYSVLTHKKADI
QQYLVLLESFENKLRDWLACLGQKFSLVSRHLIFKMVKFLCRSGLAFIGYHLLLSYTHTD
QSKEQSNAFSGFYLHPALPNLVLKATEETASLFSRYVILCSISSSNLKSYSTEDRAPADI
SNRLAGWQFYMQGVLWSLWCLRSMLKLFSGSADADFIRKTFTTIDLYEYYVYFSSAMLQR
NLQALIPTMKAIQMTCKNDHAQYEINLEDIYKVLPEIAELLSHNSLIYDVRDSASSVLPD
HDGYEISVSIDEEWHILRAMLYRHMSGFLNNQLNSSLTVEDSRANCLPFRLFVFVSDSTM
CGLDNSNLTPQIGVVCAALTNLLKSISLHIFSKSEGHLALSLLHKEGNGSSAATLKWFNE
FSWNPLKDYQKQSRQNIVNRNMKNSETELSAYELLWKICAETKFRCEDFELNNSKWLKYV
KQKLAKRWIQIYKSAELEYGTEEICKQEGNLGSPLASNGVESGSPLKGLSPDNSFFLGSG
GKDESITKKVMSFESPKEIYKRSGELLEALCVNTVNQQQAALASNRKGIVFFCREDGLIS
MESNYIWSKADWPHDGWAGSDSTPVPTCVSPGVGLGSRKGTHLGLGGATVGAGSLAKPGR
DFAGRGAYGVPGYAGIGSSGLGWEIQDEFEEFLDPPATVENIRTRALSSHPSRPLFLVGS
SNTHTYLWEFGKERATATYGVLPAANVPPPYALASISAVRFDHCGQRFATAALDGTVCTW
QLEVGGRNNIRPTESMLCFNNCASDIAYVTASGSIIATAGYSSDAINVVIWDTLAPPTTS
RASIMCHEGGARSLSVFNNDIGSGSISPYIVTGGKAGDVGVHDFRYIATGRTKRNRHSDS
NEEFASGSCSTIMRNKIGDQNSHGMLWYIPKAHTGSVTRISAVPNTNFFLTGSKDGDVKL
WDAKRAKLVYHWPKLHDRHTFLQGGVVRAAVTDIQVVSNGFLTCGGDSSVKFVQITDSLG
E
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcagcagcaagacttattgggggatgagaaattacctctgaaattgataaag
tcggacgcaatacctccgtgtccaagtggatcggaatcgtgcatagattggctacctgat
ttctcaggttactcctggcttgcttatgcctcttcttctctccttgtaatttctcactta
ccaattgctacttgttctattcctgctcctggaggtcctatttttcgccaagttttcgag
ctcggtggcggtgttgtttctgctgtttcttggtcacctgttatcccttcccctggtgta
cttgctgcttccttggattcttctattcgccttttcgaatttacagcttctttttcttgg
aggcagactacatcacttattcaatctactaaggtcgacgccattgggtggactgcttct
ggtgatggcatcatttctgtcggaatccaagtcctactgtggagaagaaactataatcct
acttcctgggaaatttcctggaagcttacgcccaaccggcctcagaatcttgtttctgct
acgtggtccattcaaggatattttgcaacagcacttcggtgtggtaatcttgctcaatct
tcttctttaccaatgcatactgcaagtaaaattgtcatagtatatcacagtgaccctata
tcccaatttgtacaagctgagttacctcatccgctgcctgtgttaatgattcagtggaga
ccgtcattaattaaacaagaggccagacatcaacggaggctgattttgttaacatgctgc
atggatggaacagtgaggttgtggtgtgagattgatgatgcaagggtcagaaaagttggc
aaggacagtaatgatcaaagagctagaaggttgttgttttgtgtatgttctgtcattgag
ataaaccagccaatgaatggaatcctgggttcagatatacatgtaagatggaccacagaa
ttgaattgtatatttaaccccagtaaagaagcagctagtcattgtttccctttagacgat
tatcaacctgatggagttggcaagtgtgaatgggtaattggttttggtcctcataggatg
gtgactctgtgggctatacattgccttgatgatgttactccaatgagatatccacgtgtg
actttgtggaagagacgtgaattggagggtcatgatccggaaacaagtagtttgttactt
cgtaaggttgtgatttcgaggaatcaagcctttggtcctccaactttatgtaatctagtc
caactatcatcttgtaattccttagcttggtttcaaataagttttcaaacactaacaagt
tctgaagaaccttctgttagatcccagacaaaaaaggttcagtcaccttgtgctcacaga
aagttaaacctggacggtcatagtggaaaaatattacaggtagcaatacattcacataaa
tatgacctcaaatttggtgcttctttggatatgaatggattactgttattgtggtcaatt
tctaatatttccaatagcatcatgggtctaccaacattaaaccccacttggaaactttca
ggaaaggttgcactaaatgaatgtagccccagatatacaaccttggactggctgccagca
gtgatagatgaaaacctaattcttcttgcaggacattctgaaggtattgattgctttgta
gttgagttctctaaagaggaagaagaaaatctatttagttacaaattgtgcacaatccct
tttactagttgtagttgcactgaaggcccagccagtgtttgtgcagttcctttgccatca
acgtgtgatgagatctttgattctggcactactatgctgttggcagtgtggaagcatacc
tttacggctttgtcatggaaactcagcatccatcaatgtgaattttctggaattcatgaa
tgtactcttgacactcgtaacatttctgaaagcaatgctcagacctttaaggaaaatata
tctggcaagagatattgtattattgtcgatccttggtcgtctatatttccagaactacac
aatcacagccaggttacaacttatgatgcggtctctccgatcactgttccattgttcgga
gaacaaaaggaatgttctgctaatgagctacttggaagctatgcagcatatcacttagcg
accggctactctgatggtagagtgagactgtggagaagtaagcctttatatatagattca
cagtgggagcttgttagtgttcttgatacacatcaaagtccaatcgtggcattatctgta
agtgactgtggccgaaagattgcaactatctcaccgtcctctctgtccaattcttcgacc
actattcatatatgggaagctgtctacctgtcatttgcaggaagctttatactagaagat
tcggttgttcttgataggaaggttgttgctctcagttggttaacattggataatggtcag
tttttacttgcagtttgcttgcagaatcagtttatggtatatggtcaaagactctgtggt
ggtcataatcttcttcagagtgtaagaccttcaaacagaaagatctggttttgtgttgca
ttaagtcatactcatcctgagattcaatatttcttttgggggcctaatgcctcagctgtg
gttgttcatagtgaatactttagtcttttcagtccgtggcttttactggttaataacaaa
ttacatgctaattgtctttccaaagaaagcaagcataattctcaagattgcatcgcggcc
gagaagtatctgcttacttcagttttcactgattctggtacatgtgatctcaaagaatca
tcagcagaagagaaacggaatcattaccagctaagatcttcttatatgataaatattcca
aatgatacattgtcaagcatttatgcagaaagctatgatttagatttaaaaattggtttt
gtaaacatattaaatgtagcagaaaagtttggtggatctctacctctttatcacccagag
tcgctcctcatgaatatatgttcaggaaactggaagcgagcacaagttgttgttcaaaat
cttgtcgattattatacttctcgaagtgtgtcttctcagatatgcagccttgcaaaatct
ggccatgacactccatttgtccaattatcagattatctcaatggaagtctatcatcaagc
tcgagcaataaagcatttcaatggagaggagatgctatgtctattacaccatcttttcag
cttcaacatgacctttcccattctgcgaccagttgggaatttaatgattccaatgcttcc
ttgatttctccttctacaagatccgaccttgttggctttcctgaaccgatagagaggctt
tatgacctcggagtcctgtctatcattgagaaggtgcaaatgcatgctatcattgatctt
ctacaagaagttagtaactcttcctctgcctatggaagtcttgataaatctggccgaagg
ttttgggttgcaataagatttcaacatctatattttgttcgaaaatttagtagaatgcca
actgaaggagagttggttgttaacacaagcgtaatcggatgggctttccactctgattgt
caagaaaatttgttcgattctcttttacctaatgaatcttcttggcatgaaatgagggat
ataggcgttggatattggtacacaaattcaacacaattacgattaaagatggaaaagttg
gcaagacatcagtatctaaaagctaaggatccaaaggcttgtgcacttctttacatagca
ctaaataggcttcaagttttggctggtcttttcaggctcagtaaggatgaaaaggacaaa
ccattggtgggatttctttcaagaaattttaaggaagataataacaaggcagctgctttg
aaaaatgcttacgtgctaatgggaaaacatcaactagagcttgctgttgcttttttcata
cttggaggcgatgctgcttctgcaatcaatgtctgtgcaaaaaatcttggagatgagcag
cttgctctagtgatatctcgtcttgtagaaggctatggcgggccgttacagtgtcaactt
atgtcaaagtttcttcttccatctgcacttgaaaagggtgatatctggctggctagcttt
ctggagtgggcattaggaaattattctcaggctattgtacgcattcttggttcgccaact
agtactgtgggtgataagccagcactagtttcttatcaggattttttttttgatccaagc
attggtgagtattgtctaatgctggcaacaagcaatagcatgaaaaatgctttaggcgag
cgaaatgctgcaaatcttgggaggtgggcgattttgatgaccgctactgccttgagcaga
tgtggccttcctcttgaaggtttggagcgtctttcctcttcttacagcatatctggtggt
tctgaacaaggtaatgtatcagaggttgcagattttgaacttctgagtgaaatgctgaat
ccatccttctgtgatccatcctcaaactggatattagtcgatgtcgctcgtcaaattgag
tcgcaagccaaatcagatatggcgatgcactacctcattaaacttttaaaagaacatcct
agttgggcagacaccaatatagaatattattctgtattgacacacaagaaggctgatata
caacaatacttggtgttacttgaaagtttcgaaaacaagttacgggattggcttgcctgt
ttagggcagaaattttcactggtctctcgccatctaatttttaagatggtaaagtttttg
tgcagaagcggcttagcgtttataggatatcatttattgctatcttacactcatacggat
cagtcaaaagaacagagcaatgcatttagtggattctacttgcatcccgcactccccaat
ctggttttgaaggctactgaagaaacggcctccttgttctcaagatatgtcattttatgt
agcataagcagttctaacttaaaatcatactccacagaagatagggcaccagcggatata
tctaacaggctagctggttggcaattttacatgcagggcgtgttgtggtcattgtggtgt
cttaggtctatgttaaagctgttttctggttcagctgatgctgattttataaggaaaaca
tttactactatcgacttgtacgagtattatgtgtatttttcatctgctatgctccaaagg
aacctacaagctcttattcctaccatgaaagctattcagatgacatgtaaaaatgatcat
gcacaatatgaaattaacttggaagatatatataaggtccttcctgaaattgcagagttg
ttgtcccacaattccttgatatatgatgtacgagattctgcttcatcagtgctacctgat
catgatggctatgagatttcagtatcaatagatgaagaatggcacattctcagggctatg
ttgtacagacatatgtctgggtttctgaacaaccagctgaattcatctctgactgttgaa
gacagtcgtgcgaattgcctaccattcagacttttcgtatttgtttctgattccacaatg
tgtgggcttgataacagtaatctaacaccacaaattggggttgtttgtgcagcattgacc
aatttactcaagagcatttctcttcatattttttctaaaagtgagggacatcttgcctta
tccctgctgcacaaagaagggaatgggtctagtgcagccactcttaagtggttcaatgaa
ttttcttggaatcctctcaaagactaccaaaagcaaagtagacagaatattgtcaatagg
aacatgaagaacagtgaaacagaattatctgcttatgaattattgtggaaaatttgtgct
gaaacaaaattcagatgtgaagattttgaactaaataattctaagtggctaaagtatgtt
aaacaaaagcttgctaaacgatggattcaaatatacaagagcgctgagttagagtatgga
actgaggaaatttgcaagcaagaaggtaatttaggcagtcctcttgctagcaatggtgtt
gaatcggggtcacctctcaagggcctttctccagataatagttttttcctgggttctgga
ggaaaggatgaatccatcaccaagaaagttatgtcttttgagagtcctaaagaaatatat
aagcggagtggagaactgttggaggcattatgtgtcaacactgttaaccaacagcaagct
gcactggctagcaatcgaaagggaatagtatttttttgccgggaagatggactaatttct
atggagtctaattatatatggtcaaaggctgactggccccatgatggatgggctggatca
gattctacccctgttcctacctgtgtttctcccggggttgggcttggaagcagaaaaggt
acacatcttggtctgggtggagcaactgttggtgcgggttctctggcaaaaccaggaaga
gacttcgcaggtcgtggagcttacggagttccaggttatgcaggtattggttcatctggt
ctcgggtgggagattcaagatgaatttgaggagtttctagacccacctgctactgtggaa
aatattaggacaagggcattatcttctcacccctctagacccttatttttggtgggttca
agcaatacacacacatacttgtgggagtttggtaaggagagggctaccgccacgtacgga
gtgcttcctgcagcaaatgtgccccctccatatgctcttgcctcgatatcagctgtgcgc
tttgatcactgtggacagagatttgcaactgctgctttagatgggacggtgtgtacatgg
cagcttgaggtggggggaaggaacaatatccgccccacagaatctatgctttgctttaac
aactgtgcatcggatatcgcatatgttactgctagtggatcaatcattgctactgctggc
tatagctccgatgccattaatgtggttatttgggatacccttgctccgcctacaacatct
cgagcttccattatgtgccatgaaggtggggctcgctctctttcggtgttcaacaatgac
atcggaagtggttctatttccccgtatattgtgacgggtggaaaggctggggatgttgga
gttcacgattttcgatacatagctactggacggactaaaagaaatagacattctgacagc
aacgaagaatttgccagtgggtcttgttcaactatcatgcgtaataaaattggggaccag
aattctcatgggatgttatggtatataccaaaggctcatacagggagtgtcaccagaata
tctgctgtcccaaataccaactttttcttgactggtagcaaagatggggatgtaaaactg
tgggatgccaagagagctaagttagtatatcactggcccaagttgcatgaccggcacact
tttcttcaaggtggagttgttcgggctgctgttactgatatacaagttgtctccaacgga
tttcttacctgtggcggagatagttcagtaaagtttgttcagattacagatagtctggga
gaatag
DBGET
integrated database retrieval system
